Plant Phenotyping

Description from the archive archive 2025-07-28.

Benchmarks archive 2025-07-28

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Libraries

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Datasets archive 2025-07-28

3 datasets whose archive record lists this task, ordered by the archive's paper count.

Subtasks archive 2025-07-28

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Parent tasks archive 2025-07-28

Most implemented papers archive 2025-07-28

29 shown of 29 papers with code (74 tagged with this task in all), ordered by repositories listed in the archive, not by stars (the archive holds no stars, so PwC's “Social” and “Latest” sorts cannot be reproduced). Papers without a page here are shown as plain text.

• Super Resolution for Root Imaging
  30 Mar 2020 4 repositories listed
  High-resolution cameras have become very helpful for plant phenotyping by providing a mechanism for tasks such as target versus background discrimination, and the measurement and analysis of fine-above-ground plant…
• Scalable learning for bridging the species gap in image-based plant phenotyping
  24 Mar 2020 3 repositories listed
  This study is applicable to use of synthetic data for automating the measurement of phenotypic traits.
• CherryPicker: Semantic Skeletonization and Topological Reconstruction of Cherry Trees
  10 Apr 2023 2 repositories listed
  Therefore, we present CherryPicker, an automatic pipeline that reconstructs photo-metric point clouds of trees, performs semantic segmentation and extracts their topological structure in form of a skeleton.
• The CropAndWeed Dataset: A Multi-Modal Learning Approach for Efficient Crop and Weed Manipulation
  6 Jan 2023 2 repositories listed
  Precision Agriculture and especially the application of automated weed intervention represents an increasingly essential research area, as sustainability and efficiency considerations are becoming more and more relevant.
• Unsupervised Domain Adaptation For Plant Organ Counting
  2 Sep 2020 2 repositories listed
  Supervised learning is often used to count objects in images, but for counting small, densely located objects, the required image annotations are burdensome to collect.
• Using cameras for precise measurement of two-dimensional plant features: CASS
  30 Apr 2019 2 repositories listed
  The use of this protocol for two-dimensional plant phenotyping will allow data capture from different cameras and environments, with comparison on the same physical scale.
• A Survey on 3D Reconstruction Techniques in Plant Phenotyping: From Classical Methods to Neural Radiance Fields (NeRF), 3D Gaussian Splatting (3DGS), and Beyond
  30 Apr 2025 1 repository listed
  Through this review, we aim to provide insights into how these diverse 3D reconstruction techniques can be effectively leveraged for automated and high-throughput plant phenotyping, contributing to the next generation…
• PhenoAssistant: A Conversational Multi-Agent AI System for Automated Plant Phenotyping
  28 Apr 2025 1 repository listed
  Plant phenotyping increasingly relies on (semi-)automated image-based analysis workflows to improve its accuracy and scalability.
• GroMo: Plant Growth Modeling with Multiview Images
  9 Mar 2025 1 repository listed
  We present the Growth Modelling (GroMo) challenge, which is designed for two primary tasks: (1) plant age prediction and (2) leaf count estimation, both essential for crop monitoring and precision agriculture.
• Spatial Transformer Network YOLO Model for Agricultural Object Detection
  31 Jul 2024 1 repository listed
  The proposed STN-YOLO aims to enhance the model's effectiveness by focusing on important areas of the image and improving the spatial invariance of the model before the detection process.
• 3D Multimodal Image Registration for Plant Phenotyping
  3 Jul 2024 1 repository listed
  By leveraging depth data, our method mitigates parallax effects and thus facilitates more accurate pixel alignment across camera modalities.
• Data-driven Crop Growth Simulation on Time-varying Generated Images using Multi-conditional Generative Adversarial Networks
  6 Dec 2023 1 repository listed
  A prerequisite for realistic and sharp crop image generation is the integration of multiple growth-influencing conditions in a model, such as an image of an initial growth stage, the associated growth time, and further…
• Segmentation and Tracking of Vegetable Plants by Exploiting Vegetable Shape Feature for Precision Spray of Agricultural Robots
  23 Jun 2023 1 repository listed
  Regarding the robust tracking of vegetable plants, to solve the challenging problem of associating vegetables with similar color and texture in consecutive images, in this paper, a novel method of Multiple Object…
• Label-Efficient Learning in Agriculture: A Comprehensive Review
  24 May 2023 1 repository listed
  In addition, a systematic review of various agricultural applications exploiting these label-efficient algorithms, such as precision agriculture, plant phenotyping, and postharvest quality assessment, is presented.
• Leaf Only SAM: A Segment Anything Pipeline for Zero-Shot Automated Leaf Segmentation
  16 May 2023 1 repository listed
  Leaf Only SAM does not perform better than the fine-tuned Mask R-CNN model on our data, but the SAM based model does not require any extra training or annotation of our new dataset.
• Benchmarking Self-Supervised Contrastive Learning Methods for Image-Based Plant Phenotyping
  1 Mar 2023 1 repository listed
  We studied the effects of the domain of the pretraining (source) dataset on the downstream performance and the influence of redundancy in the pretraining dataset on the quality of learned representations.
• Few-Shot Learning Enables Population-Scale Analysis of Leaf Traits in Populus trichocarpa
  24 Jan 2023 1 repository listed
  In this way, the current work is designed to provide the plant phenotyping community with (i) methods for fast and accurate image-based feature extraction that require minimal training data, and (ii) a new…
• Hierarchical Approach for Joint Semantic, Plant Instance, and Leaf Instance Segmentation in the Agricultural Domain
  14 Oct 2022 1 repository listed
  In this paper, we address the problem of joint semantic, plant instance, and leaf instance segmentation of crop fields from RGB data.
• Generative Adversarial Networks for Image Augmentation in Agriculture: A Systematic Review
  10 Apr 2022 1 repository listed
  In agricultural image analysis, optimal model performance is keenly pursued for better fulfilling visual recognition tasks (e.
• Self-Supervised Leaf Segmentation under Complex Lighting Conditions
  29 Mar 2022 1 repository listed
  As an essential prerequisite task in image-based plant phenotyping, leaf segmentation has garnered increasing attention in recent years.
• LeafMask: Towards Greater Accuracy on Leaf Segmentation
  8 Aug 2021 1 repository listed
  In this work, we present the LeafMask neural network, a new end-to-end model to delineate each leaf region and count the number of leaves, with two main components: 1) the mask assembly module merging position-sensitive…
• Pre-Clustering Point Clouds of Crop Fields Using Scalable Methods
  22 Jul 2021 1 repository listed
  In order to apply the recent successes of machine learning and automated plant phenotyping on a large scale using agricultural robotics, efficient and general algorithms must be designed to intelligently split crop…
• Object-Guided Instance Segmentation With Auxiliary Feature Refinement for Biological Images
  14 Jun 2021 1 repository listed
  To deal with this problem, in this paper, we propose an object-guided instance segmentation method.
• How useful is Active Learning for Image-based Plant Phenotyping?
  7 Jun 2020 1 repository listed
  To overcome this challenge, active learning algorithms have been proposed that reduce the amount of labeling needed by deep learning models to achieve good predictive performance.
• Making deep neural networks right for the right scientific reasons by interacting with their explanations
  15 Jan 2020 1 repository listed Syntology ran 1 of 3 samples · 2 unverified · 3 pointer-only (licence)
  Deep neural networks have shown excellent performances in many real-world applications.
• Crop Height and Plot Estimation for Phenotyping from Unmanned Aerial Vehicles using 3D LiDAR
  30 Oct 2019 1 repository listed
  We also present a toolchain that can be used to create phenotyping farms for use in Gazebo simulations.
• Active Learning with Gaussian Processes for High Throughput Phenotyping
  21 Jan 2019 1 repository listed
  A looming question that must be solved before robotic plant phenotyping capabilities can have significant impact to crop improvement programs is scalability.
• Instance Segmentation by Deep Coloring
  26 Jul 2018 1 repository listed
  We propose a new and, arguably, a very simple reduction of instance segmentation to semantic segmentation.
• Leaf Counting with Deep Convolutional and Deconvolutional Networks
  24 Aug 2017 1 repository listed
  In this paper, we investigate the problem of counting rosette leaves from an RGB image, an important task in plant phenotyping.

Syntology lines on 1 of the papers shown; no Syntology record for the others (a paper without an arXiv id cannot be joined to the graph, and absence from the graph layer is not a recorded non-run). “Ran” means the sample executed on a synthesized fixture, not that the paper's result was reproduced. Read from the graph 2026-09-24.