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Protein Design datasets

archive 2025-07-28

6 datasets carry the task tag "Protein Design" (the task itself: Protein Design), ordered by the archive's paper count. Page 1 of 1: 6 shown of 6. Facet routes are this site's own (the archive records the tag string, not a page).

The archive holds 12,214 dataset rows; 12,172 are listed. 6 are withheld from every listing and count here as vandalised before snapshot (6 with contact-centre spam in the title, 0 with a spam description on a row that has no homepage, no paper and no papers counted; none with more than 1 paper, 0 with a benchmark), listed in withheld.json; 1 listed row carries a vandalised description, withheld on its page. This gate never withholds a row with a homepage or a paper that resolves, and a clean description; the content rules below withhold a row whose name is spam whatever else it carries. The gate is a phrase list: these are the rows it caught, not a claim that the rest is clean. Before that gate, the site's content rules withhold 36 more rows (invite-code, gambling, travel-booking, contact-centre and similar spam in the name or on a row with nothing real behind it); they have no page and are listed in withheld.json.

Filter 51 task tags shown of 3,717, by dataset count; the full filter by modality, task and language is on /datasets

All 12,172 Question Answering 413Semantic Segmentation 347Object Detection 332Image Classification 283Classification 222Text Classification 167Language Modelling 166Text Generation 162Visual Question Answering (VQA) 144Named Entity Recognition (NER) 130Pose Estimation 124Anomaly Detection 119Action Recognition 115Instance Segmentation 111Sentiment Analysis 104Text Summarization 98Domain Adaptation 96Speech Recognition 96Reading Comprehension 95Information Retrieval 932D Object Detection 92Image Retrieval 87Machine Translation 82Relation Extraction 822D Semantic Segmentation 81Natural Language Inference 81Image Captioning 79Image Generation 79Depth Estimation 77Node Classification 75Natural Language Understanding 72Autonomous Driving 70Code Generation 70Object Tracking 693D Object Detection 67Face Recognition 67Link Prediction 67Person Re-Identification 65Data Augmentation 63Multi-Task Learning 593D Reconstruction 58Common Sense Reasoning 56Recommendation Systems 56Video Understanding 56Optical Character Recognition (OCR) 55Graph Classification 54Abstractive Text Summarization 52Emotion Recognition 52Medical Image Segmentation 52Word Embeddings 52Protein Design 6

Protein Design datasets 1–6 of 6

FLIP (Fitness Landscape Inference for Proteins)
FLIP includes several benchmark datasets that contain a variety of protein sequences, each with a real-valued label indicating its "fitness" (how well the protein performs some particular function).
BiologyProtein Function PredictionregressionProtein Design
11 papers · 0 benchmarks
Protein structures Ingraham (Dataset of protein backbones and sequences)
A data set introduced for training on the protein design task.
3DProtein Design
2 papers · 0 benchmarks
CATH 4.2
The CATH (Class, Architecture, Topology, Homology) [65] database is a comprehensive resource for protein structure classification that hierarchical group proteins based on their structural features.
BiologyProtein DesignProtein Language Model
1 paper · 1 benchmark
CATH 4.3
The CATH (Class, Architecture, Topology, Homology) [65] database is a comprehensive resource for protein structure classification that hierarchical group proteins based on their structural features.
Protein DesignProtein Language Model
1 paper · 1 benchmark
FLIP -- AAV, Designed vs mutant (adeno-associated virus)
FLIP includes several benchmark datasets that contain a variety of protein sequences, each with a real-valued label indicating its "fitness" (how well the protein performs some particular function).
BiologyProtein Function PredictionregressionProtein Design
1 paper · 0 benchmarks
CAMEO (Continuous automated model evaluation)
Xavier Robin, Juergen Haas, Rafal Gumienny, Anna Smolinski, Gerardo Tauriello, and Torsten Schwede.Continuous automated model evaluation (cameo)—perspectives on the future of fully automated evaluation of structure prediction…
BiologyProtein Structure PredictionProtein Design
0 papers · 0 benchmarks

Paper counts and descriptions are the archive's, frozen 2025-07-28; no citation counts, no stars, no trending. Sorting by "most cited" or "newest" was a live-site feature the archive does not carry.