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whole slide images

Papers archive 2025-07-28

archive papers tagged: 745 · with a code link: 321 · where Syntology ran a sample: 53 (42 with a run with no instrument failure, 11 where every run was a failure of Syntology's instrument) Syntology

Show: all tagged papersonly where code ran (53 of 745 tagged: 42 with a run with no instrument failure, 11 where every run was a failure of Syntology's instrument)

Page 6 of 8: papers 501 to 600 of 745, in archive order: by repositories listed in the archive (most first), then newest first, not by stars (the archive holds no stars, so PwC's “Social” and “Latest” sorts cannot be reproduced). Papers that list no repository come after every paper that lists one.

Papers without a page here are shown as plain text. A Syntology line reads “N ran (of which C constructed an object rather than computing a result; K with no instrument failure: H honoured, V violated, P with no contract checked; I where Syntology's instrument failed) · U unverified”; the figure “where Syntology's instrument failed” counts failures of Syntology's instrument, not of the code. When the archive marks a repository official for the paper, the line starts with that repository's state (the archive's flag, not a verdict on who wrote the code); hover it for the repositories the samples that ran came from. Abstracts are on each paper's page.

• Improving mitosis detection on histopathology images using large vision-language models
  11 Oct 2023 0 repositories listed
• Classifying Whole Slide Images: What Matters?
  5 Oct 2023 0 repositories listed
• Creating an Atlas of Normal Tissue for Pruning WSI Patching Through Anomaly Detection
  4 Oct 2023 0 repositories listed
• Advances in Kidney Biopsy Lesion Assessment through Dense Instance Segmentation
  29 Sep 2023 0 repositories listed
• Glioma subtype classification from histopathological images using in-domain and out-of-domain transfer learning: An experimental study
  29 Sep 2023 0 repositories listed
• Cross-attention-based saliency inference for predicting cancer metastasis on whole slide images
  18 Sep 2023 0 repositories listed
• Improved Breast Cancer Diagnosis through Transfer Learning on Hematoxylin and Eosin Stained Histology Images
  15 Sep 2023 0 repositories listed
• Automated segmentation of rheumatoid arthritis immunohistochemistry stained synovial tissue
  13 Sep 2023 0 repositories listed
• Open and reusable deep learning for pathology with WSInfer and QuPath
  8 Sep 2023 0 repositories listed
• Gene-induced Multimodal Pre-training for Image-omic Classification
  6 Sep 2023 0 repositories listed
• Evaluation Kidney Layer Segmentation on Whole Slide Imaging using Convolutional Neural Networks and Transformers
  5 Sep 2023 0 repositories listed
• RACR-MIL: Weakly Supervised Skin Cancer Grading using Rank-Aware Contextual Reasoning on Whole Slide Images
  29 Aug 2023 0 repositories listed
• Rapid Artefact Removal and H&E-Stained Tissue Segmentation
  25 Aug 2023 0 repositories listed
• Multi-scale Multi-site Renal Microvascular Structures Segmentation for Whole Slide Imaging in Renal Pathology
  10 Aug 2023 0 repositories listed
• Balancing Privacy and Progress in Artificial Intelligence: Anonymization in Histopathology for Biomedical Research and Education
  18 Jul 2023 0 repositories listed
• HistoColAi: An Open-Source Web Platform for Collaborative Digital Histology Image Annotation with AI-Driven Predictive Integration
  11 Jul 2023 0 repositories listed
• Physical Color Calibration of Digital Pathology Scanners for Robust Artificial Intelligence Assisted Cancer Diagnosis
  7 Jul 2023 0 repositories listed
• A Fully Automated and Explainable Algorithm for the Prediction of Malignant Transformation in Oral Epithelial Dysplasia
  6 Jul 2023 0 repositories listed
• PseudoCell: Hard Negative Mining as Pseudo Labeling for Deep Learning-Based Centroblast Cell Detection
  6 Jul 2023 0 repositories listed
• Automated identification and quantification of myocardial inflammatory infiltration in digital histological images to diagnose myocarditis
  3 Jul 2023 0 repositories listed
• Learning Nuclei Representations with Masked Image Modelling
  29 Jun 2023 0 repositories listed
• Explainable and Position-Aware Learning in Digital Pathology
  14 Jun 2023 0 repositories listed
• Semi-supervised Cell Recognition under Point Supervision
  14 Jun 2023 0 repositories listed
• Artificial intelligence in digital pathology: a systematic review and meta-analysis of diagnostic test accuracy
  13 Jun 2023 0 repositories listed
• Context-Aware Self-Supervised Learning of Whole Slide Images
  7 Jun 2023 0 repositories listed
• LESS: Label-efficient Multi-scale Learning for Cytological Whole Slide Image Screening
  6 Jun 2023 0 repositories listed
• Publicly available datasets of breast histopathology H&E whole-slide images: A scoping review
  2 Jun 2023 0 repositories listed
• Multi-scale Efficient Graph-Transformer for Whole Slide Image Classification
  25 May 2023 0 repositories listed
• Towards More Transparent and Accurate Cancer Diagnosis with an Unsupervised CAE Approach
  19 May 2023 0 repositories listed
• Cascaded Cross-Attention Networks for Data-Efficient Whole-Slide Image Classification Using Transformers
  11 May 2023 0 repositories listed
• WWFedCBMIR: World-Wide Federated Content-Based Medical Image Retrieval
  5 May 2023 0 repositories listed
• Unsupervised Mutual Transformer Learning for Multi-Gigapixel Whole Slide Image Classification
  3 May 2023 0 repositories listed
• Automated Whole Slide Imaging for Label-Free Histology using Photon Absorption Remote Sensing Microscopy
  26 Apr 2023 0 repositories listed
• Composite Biomarker Image for Advanced Visualization in Histopathology
  24 Apr 2023 0 repositories listed
• Exploring shared memory architectures for end-to-end gigapixel deep learning
  24 Apr 2023 0 repositories listed
• Realistic Data Enrichment for Robust Image Segmentation in Histopathology
  19 Apr 2023 0 repositories listed
• Ranking Loss and Sequestering Learning for Reducing Image Search Bias in Histopathology
  15 Apr 2023 0 repositories listed
• Comments on 'Fast and scalable search of whole-slide images via self-supervised deep learning'
  7 Apr 2023 0 repositories listed
• Robust Tumor Detection from Coarse Annotations via Multi-Magnification Ensembles
  29 Mar 2023 0 repositories listed
• Multi-task Learning of Histology and Molecular Markers for Classifying Diffuse Glioma
  26 Mar 2023 0 repositories listed
• Exploring Visual Prompts for Whole Slide Image Classification with Multiple Instance Learning
  23 Mar 2023 0 repositories listed
• OCELOT: Overlapped Cell on Tissue Dataset for Histopathology
  23 Mar 2023 0 repositories listed
• Self-supervised learning of a tailored Convolutional Auto Encoder for histopathological prostate grading
  21 Mar 2023 0 repositories listed
• Robust Semi-Supervised Learning for Histopathology Images through Self-Supervision Guided Out-of-Distribution Scoring
  17 Mar 2023 0 repositories listed
• Increasing the usefulness of already existing annotations through WSI registration
  12 Mar 2023 0 repositories listed
• AugDiff: Diffusion based Feature Augmentation for Multiple Instance Learning in Whole Slide Image
  11 Mar 2023 0 repositories listed
• Deep Learning for Predicting Metastasis on Melanoma WSIs
  10 Mar 2023 0 repositories listed
• Simple and Efficient Confidence Score for Grading Whole Slide Images
  8 Mar 2023 0 repositories listed
• Active Learning Enhances Classification of Histopathology Whole Slide Images with Attention-based Multiple Instance Learning
  2 Mar 2023 0 repositories listed
• BEL: A Bag Embedding Loss for Transformer enhances Multiple Instance Whole Slide Image Classification
  2 Mar 2023 0 repositories listed
• Evolutionary Computation in Action: Feature Selection for Deep Embedding Spaces of Gigapixel Pathology Images
  2 Mar 2023 0 repositories listed
• Hierarchical discriminative learning improves visual representations of biomedical microscopy
  2 Mar 2023 0 repositories listed
• Time to Embrace Natural Language Processing (NLP)-based Digital Pathology: Benchmarking NLP- and Convolutional Neural Network-based Deep Learning Pipelines
  21 Feb 2023 0 repositories listed
• Dual Attention Model with Reinforcement Learning for Classification of Histology Whole-Slide Images
  19 Feb 2023 0 repositories listed
• Federated attention consistent learning models for prostate cancer diagnosis and Gleason grading
  13 Feb 2023 0 repositories listed
• Self-supervised learning-based cervical cytology for the triage of HPV-positive women in resource-limited settings and low-data regime
  10 Feb 2023 0 repositories listed
• From slides (through tiles) to pixels: an explainability framework for weakly supervised models in pre-clinical pathology
  3 Feb 2023 0 repositories listed
• Leveraging weak complementary labels to improve semantic segmentation of hepatocellular carcinoma and cholangiocarcinoma in H&E-stained slides
  3 Feb 2023 0 repositories listed
• Detecting Histologic & Clinical Glioblastoma Patterns of Prognostic Relevance
  1 Feb 2023 0 repositories listed
• Multi-domain stain normalization for digital pathology: A cycle-consistent adversarial network for whole slide images
  23 Jan 2023 0 repositories listed
• Multicenter automatic detection of invasive carcinoma on breast whole slide images
  17 Jan 2023 0 repositories listed
• Deep Learning Provides Rapid Screen for Breast Cancer Metastasis with Sentinel Lymph Nodes
  14 Jan 2023 0 repositories listed
• Computational Pathology for Brain Disorders
  13 Jan 2023 0 repositories listed
• Artificial intelligence for diagnosing and predicting survival of patients with renal cell carcinoma: Retrospective multi-center study
  12 Jan 2023 0 repositories listed
• Weakly Supervised Joint Whole-Slide Segmentation and Classification in Prostate Cancer
  7 Jan 2023 0 repositories listed
• An interpretable machine learning system for colorectal cancer diagnosis from pathology slides
  6 Jan 2023 0 repositories listed
• Benchmarking common uncertainty estimation methods with histopathological images under domain shift and label noise
  3 Jan 2023 0 repositories listed
• LNPL-MIL: Learning from Noisy Pseudo Labels for Promoting Multiple Instance Learning in Whole Slide Image
  1 Jan 2023 0 repositories listed
• Domain-specific transfer learning in the automated scoring of tumor-stroma ratio from histopathological images of colorectal cancer
  30 Dec 2022 0 repositories listed
• Multi-Scale Relational Graph Convolutional Network for Multiple Instance Learning in Histopathology Images
  17 Dec 2022 0 repositories listed
• Deep Learning-Based Prediction of Molecular Tumor Biomarkers from H&E: A Practical Review
  27 Nov 2022 0 repositories listed
• An unobtrusive quality supervision approach for medical image annotation
  11 Nov 2022 0 repositories listed
• Combination of multiple neural networks using transfer learning and extensive geometric data augmentation for assessing cellularity scores in histopathology images
  9 Nov 2022 0 repositories listed
• An Aggregation of Aggregation Methods in Computational Pathology
  2 Nov 2022 0 repositories listed
• Embedding Space Augmentation for Weakly Supervised Learning in Whole-Slide Images
  31 Oct 2022 0 repositories listed
• Region of Interest Detection in Melanocytic Skin Tumor Whole Slide Images
  29 Oct 2022 0 repositories listed
• Using Whole Slide Image Representations from Self-Supervised Contrastive Learning for Melanoma Concordance Regression
  10 Oct 2022 0 repositories listed
• A Pathologist-Informed Workflow for Classification of Prostate Glands in Histopathology
  27 Sep 2022 0 repositories listed
• Learning Binary and Sparse Permutation-Invariant Representations for Fast and Memory Efficient Whole Slide Image Search
  29 Aug 2022 0 repositories listed
• EGFR Mutation Prediction of Lung Biopsy Images using Deep Learning
  26 Aug 2022 0 repositories listed
• From WSI-level to Patch-level: Structure Prior Guided Binuclear Cell Fine-grained Detection
  26 Aug 2022 0 repositories listed
• Mitosis Detection, Fast and Slow: Robust and Efficient Detection of Mitotic Figures
  26 Aug 2022 0 repositories listed
• Multiplex-detection Based Multiple Instance Learning Network for Whole Slide Image Classification
  6 Aug 2022 0 repositories listed
• End-to-end Learning for Image-based Detection of Molecular Alterations in Digital Pathology
  30 Jun 2022 0 repositories listed
• Test-time image-to-image translation ensembling improves out-of-distribution generalization in histopathology
  20 Jun 2022 0 repositories listed
• A comparative study between vision transformers and CNNs in digital pathology
  1 Jun 2022 0 repositories listed
• A review of machine learning approaches, challenges and prospects for computational tumor pathology
  31 May 2022 0 repositories listed
• A Deep Reinforcement Learning Framework for Rapid Diagnosis of Whole Slide Pathological Images
  5 May 2022 0 repositories listed
• Differentiable Zooming for Multiple Instance Learning on Whole-Slide Images
  26 Apr 2022 0 repositories listed Syntology 4 ran (of which 4 constructed an object rather than computing a result; 4 with no instrument failure: 0 honoured, 0 violated, 4 with no contract checked; 0 where Syntology's instrument failed) · 0 unverified; every one of the 4 samples that ran constructed an object rather than computing a result (of 4 harvested samples)
• Colorectal cancer survival prediction using deep distribution based multiple-instance learning
  24 Apr 2022 0 repositories listed
• Evaluation of Multi-Scale Multiple Instance Learning to Improve Thyroid Cancer Classification
  22 Apr 2022 0 repositories listed
• Deep learning-based approach to reveal tumor mutational burden status from whole slide images across multiple cancer types
  7 Apr 2022 0 repositories listed
• Hospital-Agnostic Image Representation Learning in Digital Pathology
  5 Apr 2022 0 repositories listed
• Federated Learning for the Classification of Tumor Infiltrating Lymphocytes
  30 Mar 2022 0 repositories listed
• Learning to Predict RNA Sequence Expressions from Whole Slide Images with Applications for Search and Classification
  26 Mar 2022 0 repositories listed
• Imaging-based histological features are predictive of MET alterations in Non-Small Cell Lung Cancer
  18 Mar 2022 0 repositories listed
• Breast Cancer Molecular Subtypes Prediction on Pathological Images with Discriminative Patch Selecting and Multi-Instance Learning
  15 Mar 2022 0 repositories listed
• Automatic Fine-grained Glomerular Lesion Recognition in Kidney Pathology
  11 Mar 2022 0 repositories listed
• Mutual Contrastive Low-rank Learning to Disentangle Whole Slide Image Representations for Glioma Grading
  8 Mar 2022 0 repositories listed
• Multi-Scale Hybrid Vision Transformer for Learning Gastric Histology: AI-Based Decision Support System for Gastric Cancer Treatment
  17 Feb 2022 0 repositories listed

Syntology lines on 1 of the papers shown; no Syntology record for the others (a paper without an arXiv id cannot be joined to the graph, and absence from the graph layer is not a recorded non-run). “Ran” means the sample executed on a synthesized fixture, not that the paper's result was reproduced; each line links to that paper's sample list. Syntology's record for this page has not changed since 2026-09-28, the first build that kept a record date for it; when this build read Syntology's graph is in the build record. For agents: get_harvested_code_for_paper(arxiv_id) lists each paper's samples; how to connect.