Papers › UNet 3+: A Full-Scale Connected UNet for Medical Image Segmentation

UNet 3+: A Full-Scale Connected UNet for Medical Image Segmentation

19 Apr 2020arXiv:2004.08790archive 2025-07-28

Huimin Huang, Lanfen Lin, Ruofeng Tong, Hongjie Hu, Qiaowei Zhang, Yutaro Iwamoto, Xianhua Han, Yen-Wei Chen, Jian Wu

Recently, a growing interest has been seen in deep learning-based semantic segmentation. UNet, which is one of deep learning networks with an encoder-decoder architecture, is widely used in medical image segmentation. Combining multi-scale features is one of important factors for accurate segmentation. UNet++ was developed as a modified Unet by designing an architecture with nested and dense skip connections. However, it does not explore sufficient information from full scales and there is still a large room for improvement. In this paper, we propose a novel UNet 3+, which takes advantage of full-scale skip connections and deep supervisions. The full-scale skip connections incorporate low-level details with high-level semantics from feature maps in different scales; while the deep supervision learns hierarchical representations from the full-scale aggregated feature maps. The proposed method is especially benefiting for organs that appear at varying scales. In addition to accuracy improvements, the proposed UNet 3+ can reduce the network parameters to improve the computation efficiency. We further propose a hybrid loss function and devise a classification-guided module to enhance the organ boundary and reduce the over-segmentation in a non-organ image, yielding more accurate segmentation results. The effectiveness of the proposed method is demonstrated on two datasets. The code is available at: github.com/ZJUGiveLab/UNet-Version

PaperPDFCodeCode Syntology ran

In Syntology View this paper on Syntology: its repositories, every harvested function with whether it ran, its licence and the call to fetch it.

Open this paper in Syntology's Atlas, the map of the papers in Syntology's graph and their citations.

For agents, Syntology's MCP tool lists every function and class Syntology harvested from this paper and whether it ran (how to connect): get_harvested_code_for_paper(arxiv_id="2004.08790")

Code

Syntology Ran 9 of 17 code samples harvested from 3 repositories linked to this paper; 8 have no recorded run. Of those that ran: 3 ran · our draft was wrong; 1 ran · fixture could not drive it; 5 ran with no contract checked.

By repository: official repository: 1 sample from 1 repository, 1 ran; community (archive-listed): 16 samples from 2 repositories, 8 ran. The run record, sample by sample. “Ran” means executed on a synthesized input, not that the code is correct or reproduces the paper.

ZJUGiveLab/UNet-Version officialmentioned in paperpytorch report
DaloroAT/first_break_picking mentioned on GitHubpytorch report
Owais-Ansari/Unet3plus mentioned on GitHubpytorch report
hamidriasat/UNet-3-Plus mentioned on GitHubtfMIT report

Repository list and official/mentioned flags are the archive's, frozen 2025-07-28. Reachability, where shown, is from one Syntology probe window (2026-09-16 to 2026-09-18); repositories not probed show nothing. GitHub stars are not tracked.

Code Syntology ran Syntology

17 samples harvested; 9 ran; 0 honoured the contract we drafted; 8 have no recorded run. Read from Syntology's graph 2026-09-25; that is when this build read the record, not when the samples ran.

3ran · our draft was wrong
1ran · fixture could not drive it
5ran
8unverified

Licence: 1 of the 17 samples is pointer only, meaning Syntology does not serve that copy's text. This page shows no code text for any sample; each one links to its file in the repository.

Harvested from 3 repositories linked to this paper, official or community; each sample names its own and says which. “Ran” means the sample executed on a synthesized input. It does not mean the output is correct, and nothing here reproduces the paper's results. “Honoured” and “violated” refer to a contract Syntology drafted from the code itself; “our draft was wrong” and “fixture could not drive it” are failures of Syntology's instrument, not of the code.

Each sample ends with its code_sha256, Syntology's identity for that exact code. An agent fetches the stored sample with Syntology's MCP tool get_code(code_sha256="…") (how to connect); click an identity to copy that call.

Repository labels, per sample. official repository: The archive marks this repository official for the paper. named in the paper: The archive records that the paper mentions this repository; it is not marked official. community (archive-listed): In the archive's code links for this paper, not marked official and not recorded as mentioned in the paper. found in paper text by Syntology: Syntology found this repository in the paper's own text; whether it is the authors' implementation is not asserted. community: Not in the archive's code links for this paper; a community repository Syntology harvested. Samples from a repository marked official are listed first. Licence labels name the repository's licence as recorded at harvest. “Pointer only” means Syntology does not serve that copy's text, for one of four reasons: no licence file was found; the licence was not identified; the licence is recorded as permissive but that copy's record is not marked cleared; or the licence is outside the permissive list Syntology serves text under (MIT, Apache-2.0, BSD and similar). Some licences outside that list permit redistribution, such as WTFPL, and GPL-3.0 under its conditions; they are simply not on the list. Hover a licence label for the reason. File links open the file on GitHub at the default branch, which may have changed since the harvest.

BCE_loss ZJUGiveLab/UNet-Version/loss/bceLoss.py official repository ran · fixture could not drive it no licence file found · pointer only · 056e2e87a305e0a2 · report
conv2dTranspose Owais-Ansari/Unet3plus/utils/models.py community (archive-listed) ran · our draft was wrong Apache-2.0 (permissive) · 9d9f51c95a9339d6 · report
conv_block hamidriasat/UNet-3-Plus/models/unet3plus_utils.py community (archive-listed) ran MIT (permissive) · dc407cea8c628ee7 · report
dot_product hamidriasat/UNet-3-Plus/models/unet3plus_utils.py community (archive-listed) ran MIT (permissive) · f5be84a091639139 · report
double_conv Owais-Ansari/Unet3plus/utils/models.py community (archive-listed) ran · our draft was wrong Apache-2.0 (permissive) · a505d8b9327be637 · report
focal_loss hamidriasat/UNet-3-Plus/losses/loss.py community (archive-listed) ran MIT (permissive) · 7b23f6df494f23b1 · report
iou hamidriasat/UNet-3-Plus/losses/loss.py community (archive-listed) ran MIT (permissive) · c937560f46f9d96f · report
iou_loss hamidriasat/UNet-3-Plus/losses/loss.py community (archive-listed) ran MIT (permissive) · 013ffa32c7802109 · report
single_conv Owais-Ansari/Unet3plus/utils/models.py community (archive-listed) ran · our draft was wrong Apache-2.0 (permissive) · 3649cd96f92a4aa2 · report
prepare_model hamidriasat/UNet-3-Plus/models/model.py community (archive-listed) unverified MIT (permissive) · 0862fd72cdccf945 · report
unet3p_hybrid_loss hamidriasat/UNet-3-Plus/losses/unet_loss.py community (archive-listed) unverified MIT (permissive) · 7c0582a5703a92bd · report
unet3plus hamidriasat/UNet-3-Plus/models/unet3plus.py community (archive-listed) unverified MIT (permissive) · 54e2be300f32a118 · report
unet3plus_backbone hamidriasat/UNet-3-Plus/models/backbones.py community (archive-listed) unverified MIT (permissive) · 407f5cbe72a47e63 · report
unet3plus_deepsup hamidriasat/UNet-3-Plus/models/unet3plus_deep_supervision.py community (archive-listed) unverified MIT (permissive) · ab0d3102a089be66 · report
unet3plus_deepsup_cgm hamidriasat/UNet-3-Plus/models/unet3plus_deep_supervision_cgm.py community (archive-listed) unverified MIT (permissive) · 94663be587a24995 · report
vgg16_backbone hamidriasat/UNet-3-Plus/models/backbones.py community (archive-listed) unverified MIT (permissive) · 3ca7d63a43c639c4 · report
vgg19_backbone hamidriasat/UNet-3-Plus/models/backbones.py community (archive-listed) unverified MIT (permissive) · 16077947846367b1 · report

Tasks

DecoderImage SegmentationMedical Image SegmentationSegmentationSemantic Segmentation

Results from the paper archive 2025-07-28

TaskDatasetModelMetricValueRank at snapshotLeaderboardReport
Medical Image Segmentation LiTS2017 UNet 3+ Dice 0.9675 #1 of 2 Archive leaderboard report
Medical Image Segmentation LiTS2017 UNet 3+ w/o DS Dice 0.9580 #2 of 2 Archive leaderboard report

Ranks are positions in the archive's leaderboards as they stood at the 2025-07-28 snapshot. Results published since then are not among these rows, so a rank here is not a current standing.

Methods

UNet++

Report a problem or propose a change · a person checks every report against the paper or source before anything changes; decisions are listed on /corrections