Papers › Fourier-Net: Fast Image Registration with Band-limited Deformation

Fourier-Net: Fast Image Registration with Band-limited Deformation

29 Nov 2022arXiv:2211.16342archive 2025-07-28

Xi Jia, Joseph Bartlett, Wei Chen, Siyang Song, Tianyang Zhang, Xinxing Cheng, Wenqi Lu, Zhaowen Qiu, Jinming Duan

Unsupervised image registration commonly adopts U-Net style networks to predict dense displacement fields in the full-resolution spatial domain. For high-resolution volumetric image data, this process is however resource-intensive and time-consuming. To tackle this problem, we propose the Fourier-Net, replacing the expansive path in a U-Net style network with a parameter-free model-driven decoder. Specifically, instead of our Fourier-Net learning to output a full-resolution displacement field in the spatial domain, we learn its low-dimensional representation in a band-limited Fourier domain. This representation is then decoded by our devised model-driven decoder (consisting of a zero padding layer and an inverse discrete Fourier transform layer) to the dense, full-resolution displacement field in the spatial domain. These changes allow our unsupervised Fourier-Net to contain fewer parameters and computational operations, resulting in faster inference speeds. Fourier-Net is then evaluated on two public 3D brain datasets against various state-of-the-art approaches. For example, when compared to a recent transformer-based method, named TransMorph, our Fourier-Net, which only uses 2.2\% of its parameters and 6.66\% of the multiply-add operations, achieves a 0.5\% higher Dice score and an 11.48 times faster inference speed. Code is available at \url{https://github.com/xi-jia/Fourier-Net}.

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Tasks

DecoderImage RegistrationMedical Image RegistrationUnsupervised Image Registration

Results from the paper archive 2025-07-28

TaskDatasetModelMetricValueRank at snapshotLeaderboardReport
Medical Image Registration OASIS Fourier-Net val dsc 84.7 #8 of 8 Archive leaderboard report

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Methods

Concatenated Skip ConnectionConvolutionMax PoolingReLUU-Net

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