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Constructing and Exploring Intermediate Domains in Mixed Domain Semi-supervised Medical Image Segmentation

13 Apr 2024CVPR 2024 1arXiv:2404.08951archive 2025-07-28

Qinghe Ma, Jian Zhang, Lei Qi, Qian Yu, Yinghuan Shi, Yang Gao

Both limited annotation and domain shift are prevalent challenges in medical image segmentation. Traditional semi-supervised segmentation and unsupervised domain adaptation methods address one of these issues separately. However, the coexistence of limited annotation and domain shift is quite common, which motivates us to introduce a novel and challenging scenario: Mixed Domain Semi-supervised medical image Segmentation (MiDSS). In this scenario, we handle data from multiple medical centers, with limited annotations available for a single domain and a large amount of unlabeled data from multiple domains. We found that the key to solving the problem lies in how to generate reliable pseudo labels for the unlabeled data in the presence of domain shift with labeled data. To tackle this issue, we employ Unified Copy-Paste (UCP) between images to construct intermediate domains, facilitating the knowledge transfer from the domain of labeled data to the domains of unlabeled data. To fully utilize the information within the intermediate domain, we propose a symmetric Guidance training strategy (SymGD), which additionally offers direct guidance to unlabeled data by merging pseudo labels from intermediate samples. Subsequently, we introduce a Training Process aware Random Amplitude MixUp (TP-RAM) to progressively incorporate style-transition components into intermediate samples. Compared with existing state-of-the-art approaches, our method achieves a notable 13.57% improvement in Dice score on Prostate dataset, as demonstrated on three public datasets. Our code is available at https://github.com/MQinghe/MiDSS .

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sigmoid_rampup MQinghe/MiDSS/code/utils/ramps.py official repository ran · honoured contract fingerprinted Apache-2.0 (permissive) · 3fb68ed6809a8085 · report
SoftLable MQinghe/MiDSS/code/dataloaders/custom_transforms.py official repository ran fingerprinted Apache-2.0 (permissive) · 543991aebf9b218a · report
ToMultiLabel MQinghe/MiDSS/code/dataloaders/custom_transforms.py official repository ran fingerprinted Apache-2.0 (permissive) · a17610fbc65c8591 · report
cosine_rampdown MQinghe/MiDSS/code/utils/ramps.py official repository ran · honoured contract fingerprinted Apache-2.0 (permissive) · 214e4ee9afcfa0e3 · report
count_params MQinghe/MiDSS/code/networks/unet.py official repository ran Apache-2.0 (permissive) · c9896e2a9e9768ef · report
dice MQinghe/MiDSS/code/utils/metrics.py official repository ran fingerprinted Apache-2.0 (permissive) · 271f6a7053a24e6c · report
dice_loss MQinghe/MiDSS/code/utils/losses.py official repository ran fingerprinted Apache-2.0 (permissive) · 9f3489c005e0165d · report
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distance_transform MQinghe/MiDSS/code/utils/metrics.py official repository ran Apache-2.0 (permissive) · 842fb3864257695c · report
encode_segmap MQinghe/MiDSS/code/dataloaders/utils.py official repository ran Apache-2.0 (permissive) · 75e298e708abee58 · report
entropy_loss MQinghe/MiDSS/code/utils/losses.py official repository ran fingerprinted Apache-2.0 (permissive) · f8c429b95e4ae707 · report
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get_cosine_schedule_with_warmup MQinghe/MiDSS/code/train_MNMS.py official repository ran Apache-2.0 (permissive) · 26ea400f0a8a65f4 · report
recursive_glob MQinghe/MiDSS/code/dataloaders/utils.py official repository ran fingerprinted Apache-2.0 (permissive) · f1e67bfcea91df50 · report
to_multilabel MQinghe/MiDSS/code/dataloaders/custom_transforms.py official repository ran Apache-2.0 (permissive) · d2923c3e5c5d5484 · report
untransform MQinghe/MiDSS/code/dataloaders/utils.py official repository ran fingerprinted Apache-2.0 (permissive) · 069a755a80d803f2 · report
cal_dice MQinghe/MiDSS/code/utils/metrics.py official repository unverified Apache-2.0 (permissive) · ca40feece5ce04cb · report
linear_rampup MQinghe/MiDSS/code/utils/ramps.py official repository unverified Apache-2.0 (permissive) · 069122bd5268cc56 · report

Tasks

Domain AdaptationImage SegmentationMedical Image SegmentationSegmentationSemantic SegmentationSemi-supervised Medical Image SegmentationTransfer LearningUnsupervised Domain Adaptation

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Methods

AWARECopy-PasteMixup

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