Datasets › QM9

QM9

archive 2025-07-28

QM9 provides quantum chemical properties (at DFT level) for a relevant, consistent, and comprehensive chemical space of small organic molecules. This database may serve the benchmarking of existing methods, development of new methods, such as hybrid quantum mechanics/machine learning, and systematic identification of structure-property relationships.

Source: QM9 Dataset Image Source: https://pubs.acs.org/doi/pdf/10.1021/ci300415d

Benchmarks archive 2025-07-28

All 9 leaderboards whose dataset resolves to this page shown (sort by any header). "First row" is the archive's own first row at snapshot, in the archive's row order; nothing here re-ranks and metric direction is not asserted.

Papers archive 2025-07-28

30 shown of 42 papers with a leaderboard row on this dataset's benchmarks, newest first. The archive's own "papers using this dataset" list was never published, so this is the benchmark-backed subset; the archive's count for this dataset is 76. The Syntology column is from Syntology's graph (read 2026-09-24), stated per sample; it is not part of any archive number.

DateSamples run Syntology
GotenNet: Rethinking Efficient 3D Equivariant Graph Neural Networks 2 3 24 Apr 2025 not harvested
All-atom Diffusion Transformers: Unified generative modelling of molecules and materials 1 1 5 Mar 2025 ran 6 of 7 samples (1 unverified; 7 pointer-only for licence)
FIT-GNN: Faster Inference Time for GNNs Using Coarsening 1 1 19 Oct 2024 not harvested
Any2Graph: Deep End-To-End Supervised Graph Prediction With An Optimal Transport Loss 1 4 19 Feb 2024 ran 3 of 5 samples (2 unverified; 5 pointer-only for licence)
Bayesian Uncertainty for Gradient Aggregation in Multi-Task Learning 1 1 6 Feb 2024 ran 7 of 8 samples (1 unverified)
Symphony: Symmetry-Equivariant Point-Centered Spherical Harmonics for 3D Molecule Generation 1 1 27 Nov 2023 ran 1 of 1 samples (0 unverified)
A Universal Framework for Accurate and Efficient Geometric Deep Learning of Molecular Systems 1 2 19 Nov 2023 ran 3 of 3 samples (0 unverified; 3 pointer-only for licence)
EquiformerV2: Improved Equivariant Transformer for Scaling to Higher-Degree Representations 2 1 21 Jun 2023 ran 3 of 5 samples (2 unverified)
TensorNet: Cartesian Tensor Representations for Efficient Learning of Molecular Potentials 3 1 10 Jun 2023 ran 3 of 7 samples (4 unverified)
Geometric Latent Diffusion Models for 3D Molecule Generation 2 1 2 May 2023 ran 4 of 9 samples (5 unverified)
Wigner kernels: body-ordered equivariant machine learning without a basis 0 1 7 Mar 2023 not harvested
Linear-scaling kernels for protein sequences and small molecules outperform deep learning while providing uncertainty quantitation and improved interpretability 2 1 7 Feb 2023 ran 0 of 2 samples (2 unverified)
Uni-Mol: A Universal 3D Molecular Representation Learning Framework 1 1 8 Sep 2022 not harvested
Equiformer: Equivariant Graph Attention Transformer for 3D Atomistic Graphs 4 1 23 Jun 2022 ran 3 of 4 samples (1 unverified)
ComENet: Towards Complete and Efficient Message Passing for 3D Molecular Graphs 1 1 17 Jun 2022 not harvested
Equivariant Diffusion for Molecule Generation in 3D 4 1 31 Mar 2022 ran 7 of 13 samples (6 unverified; 2 pointer-only for licence)
TorchMD-NET: Equivariant Transformers for Neural Network based Molecular Potentials 1 1 5 Feb 2022 not harvested
Multi-Task Learning as a Bargaining Game 4 1 2 Feb 2022 ran 1 of 3 samples (2 unverified; 2 pointer-only for licence)
Geometric and Physical Quantities Improve E(3) Equivariant Message Passing 2 1 6 Oct 2021 ran 0 of 8 samples (8 unverified)
ChemRL-GEM: Geometry Enhanced Molecular Representation Learning for Property Prediction 0 1 11 Jun 2021 not harvested
E(n) Equivariant Graph Neural Networks 5 1 19 Feb 2021 ran 15 of 15 samples (0 unverified; 7 pointer-only for licence)
Spherical Message Passing for 3D Graph Networks 1 1 9 Feb 2021 ran 1 of 1 samples (0 unverified; 1 pointer-only for licence)
Equivariant message passing for the prediction of tensorial properties and molecular spectra 2 1 5 Feb 2021 ran 21 of 33 samples (12 unverified)
Fast and Uncertainty-Aware Directional Message Passing for Non-Equilibrium Molecules 6 1 28 Nov 2020 ran 5 of 9 samples (4 unverified; 9 pointer-only for licence)
Molecular Mechanics-Driven Graph Neural Network with Multiplex Graph for Molecular Structures 3 2 15 Nov 2020 not harvested
Heterogeneous Molecular Graph Neural Networks for Predicting Molecule Properties 1 1 26 Sep 2020 ran 3 of 3 samples (0 unverified; 3 pointer-only for licence)
A community-powered search of machine learning strategy space to find NMR property prediction models 1 2 13 Aug 2020 not harvested
Transferable Multi-level Attention Neural Network for Accurate Prediction of Quantum Chemistry Properties via Multi-task Learning 0 2 30 Jun 2020 not harvested
Self-Supervised Graph Transformer on Large-Scale Molecular Data 3 2 18 Jun 2020 not harvested
Directional Message Passing for Molecular Graphs 4 2 6 Mar 2020 ran 1 of 10 samples (9 unverified; 3 pointer-only for licence)

The full list of 42 is in the JSON twin.

Dataset loaders archive 2025-07-28

2 loaders as listed in the archive; links are outbound and not re-checked here.

Tasks archive 2025-07-28

License archive 2025-07-28

No licence recorded in the archive. Absence here is not a statement about the dataset's terms.

Modalities archive 2025-07-28

No modality tagged.

Languages archive 2025-07-28

Variants archive 2025-07-28

  • QM9

1 variant name, as the archive lists them.

Report a problem or propose a change · a person checks every report against the paper or source before anything changes; decisions are listed on /corrections