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DrugBank (DrugBank 6.0: the DrugBank Knowledgebase for 2024)
Abstract: First released in 2006, DrugBank (https://go.drugbank.com) has grown to become the 'gold standard' knowledge resource for drug, drug-target and related pharmaceutical information. DrugBank is widely used across many diverse biomedical research and clinical applications, and averages more than 30 million views/year. Since its last update in 2018, we have been actively enhancing the quantity and quality of the drug data in this knowledgebase. In this latest release (DrugBank 6.0), the number of FDA approved drugs has grown from 2646 to 4563 (a 72% increase), the number of investigational drugs has grown from 3394 to 6231 (a 38% increase), the number of drug-drug interactions increased from 365 984 to 1 413 413 (a 300% increase), and the number of drug-food interactions expanded from 1195 to 2475 (a 200% increase). In addition to this notable expansion in database size, we have added thousands of new, colorful, richly annotated pathways depicting drug mechanisms and drug metabolism. Likewise, existing datasets have been significantly improved and expanded, by adding more information on drug indications, drug-drug interactions, drug-food interactions and many other relevant data types for 11 891 drugs. We have also added experimental and predicted MS/MS spectra, 1D/2D-NMR spectra, CCS (collision cross section), RT (retention time) and RI (retention index) data for 9464 of DrugBank's 11 710 small molecule drugs. These and other improvements should make DrugBank 6.0 even more useful to a much wider research audience ranging from medicinal chemists to metabolomics specialists to pharmacologists.
More Information:
- Paper: DrugBank 6.0: the DrugBank Knowledgebase for 2024
- PMID: 37953279
- PMCID: PMC10767804
- DOI: 10.1093/nar/gkad976
Knox, C., Wilson, M., Klinger, C. M., Franklin, M., Oler, E., Wilson, A., Pon, A., Cox, J., Chin, N. E. L., Strawbridge, S. A., Garcia-Patino, M., Kruger, R., Sivakumaran, A., Sanford, S., Doshi, R., Khetarpal, N., Fatokun, O., Doucet, D., Zubkowski, A., Rayat, D. Y., … Wishart, D. S. (2024). DrugBank 6.0: the DrugBank Knowledgebase for 2024. Nucleic acids research, 52(D1), D1265–D1275. https://doi.org/10.1093/nar/gkad976
Benchmarks archive 2025-07-28
All 1 leaderboard whose dataset resolves to this page shown (sort by any header). "First row" is the archive's own first row at snapshot, in the archive's row order; nothing here re-ranks and metric direction is not asserted.
| First row (archive order) | Paper | Code | ||||
|---|---|---|---|---|---|---|
| Drug–drug Interaction Extraction | DrugBank | Ours (CADGL) AUROC 99.49 | CADGL: Context-Aware Deep Graph Learning for Predicting... | — | 3 | Compare |
Papers archive 2025-07-28
3 shown of 3 papers with a leaderboard row on this dataset's benchmarks, newest first. The archive's own "papers using this dataset" list was never published, so this is the benchmark-backed subset; the archive's count for this dataset is 3. The Syntology column is from Syntology's graph (read 2026-09-24), stated per sample; it is not part of any archive number.
| Date | Samples run Syntology | |||
|---|---|---|---|---|
| CADGL: Context-Aware Deep Graph Learning for Predicting Drug-Drug Interactions | 0 | 1 | 25 Mar 2024 | not harvested |
| SSI–DDI: Substructure–Substructure Interactions for Drug–Drug Interaction Prediction | 2 | 1 | 7 Nov 2021 | not harvested |
| Drug-Drug Adverse Effect Prediction with Graph Co-Attention | 1 | 1 | 2 May 2019 | not harvested |
Dataset loaders archive 2025-07-28
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Tasks archive 2025-07-28
License archive 2025-07-28
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Modalities archive 2025-07-28
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Languages archive 2025-07-28
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Variants archive 2025-07-28
- DrugBank
1 variant name, as the archive lists them.
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