Electron Tomography

Benchmarks archive 2025-07-28

No benchmark for this task in the archive.

Libraries

Not in the archive: the export carries no per-task library table, so there is nothing to show at snapshot 2025-07-28.

Datasets archive 2025-07-28

No dataset record in the archive lists this task.

Subtasks archive 2025-07-28

No subtask under this task in the archive's task tree.

Parent tasks archive 2025-07-28

Most implemented papers archive 2025-07-28

13 shown of 13 papers with code (47 tagged with this task in all), ordered by repositories listed in the archive, not by stars (the archive holds no stars, so PwC's “Social” and “Latest” sorts cannot be reproduced). Papers without a page here are shown as plain text.

• AITom: Open-source AI platform for cryo-electron tomography data analysis
  8 Nov 2019 2 repositories listed
  Cryo-electron tomography (cryo-ET) is an emerging technology for the 3D visualization of structural organizations and interactions of subcellular components at near-native state and sub-molecular resolution.
• 2.5D U-Net with Depth Reduction for 3D CryoET Object Identification
  19 Feb 2025 1 repository listed
  Cryo-electron tomography (cryoET) is a crucial technique for unveiling the structure of protein complexes.
• End-to-end localized deep learning for Cryo-ET
  25 Jan 2025 1 repository listed
  Cryo-electron tomography (cryo-ET) enables 3D visualization of cellular environments.
• Training-free CryoET Tomogram Segmentation
  8 Jul 2024 1 repository listed
  In addition to prompt-based single-particle instance segmentation, our approach can automatically search for similar features, facilitating full tomogram semantic segmentation with only one prompt.
• Ice-Tide: Implicit Cryo-ET Imaging and Deformation Estimation
  4 Mar 2024 1 repository listed
  We introduce ICE-TIDE, a method for cryogenic electron tomography (cryo-ET) that simultaneously aligns observations and reconstructs a high-resolution volume.
• A Deep Learning Method for Simultaneous Denoising and Missing Wedge Reconstruction in Cryogenic Electron Tomography
  9 Nov 2023 1 repository listed
  Cryogenic electron tomography is a technique for imaging biological samples in 3D.
• Real-Time Tilt Undersampling Optimization during Electron Tomography of Beam Sensitive Samples using Golden Ratio Scanning and RECAST3D
  1 Apr 2023 1 repository listed
  Therefore, it is important to determine the optimal number of projections that minimizes both beam exposure and undersampling artifacts for accurate reconstructions of beam-sensitive samples.
• Deep learning-based identification of sub-nuclear structures in FIB-SEM images
  19 Jul 2022 1 repository listed
  Lastly, we highlight specific aspects of the model that can be optimized for its broad application to other volumetric imaging data as well as in situ cryo-electron tomography.
• Boosting Active Learning via Improving Test Performance
  10 Dec 2021 1 repository listed
  In this work, we explore such an impact by theoretically proving that selecting unlabeled data of higher gradient norm leads to a lower upper-bound of test loss, resulting in better test performance.
• Statistical spatial analysis for cryo-electron tomography
  14 Jul 2021 1 repository listed
  Here, we designed and implemented first and the second-order, uni- and bivariate PPA functions in a Python package for statistical spatial analysis of particles located in three dimensional regions of arbitrary shape,…
• Self-Supervised Cryo-Electron Tomography Volumetric Image Restoration From Single Noisy Volume With Sparsity Constraint
  1 Jan 2021 1 repository listed
  The proposed method only requires a single noisy data as training input and no ground-truth is needed in the whole training procedure.
• Shape from Projections via Differentiable Forward Projector for Computed Tomography
  29 Jun 2020 1 repository listed
  In this paper, we propose a differentiable forward model for 3D meshes that bridge the gap between the forward model for 3D surfaces and optimization.
• BioEM: GPU-accelerated computing of Bayesian inference of electron microscopy images
  21 Sep 2016 1 repository listed
  In cryo-electron microscopy (EM), molecular structures are determined from large numbers of projection images of individual particles.