Browse State-of-the-Art › Cell Segmentation › Papers, page 2

Cell Segmentation

Papers archive 2025-07-28

archive papers tagged: 178 · with a code link: 91 · where Syntology ran a sample: 7 (6 with a run with no instrument failure, 1 where every run was a failure of Syntology's instrument) Syntology

Show: all tagged papersonly where code ran (7 of 178 tagged: 6 with a run with no instrument failure, 1 where every run was a failure of Syntology's instrument)

Page 2 of 2: papers 101 to 178 of 178, in archive order: by repositories listed in the archive (most first), then newest first, not by stars (the archive holds no stars, so PwC's “Social” and “Latest” sorts cannot be reproduced). Papers that list no repository come after every paper that lists one.

Papers without a page here are shown as plain text. A Syntology line reads “N ran (of which C constructed an object rather than computing a result; K with no instrument failure: H honoured, V violated, P with no contract checked; I where Syntology's instrument failed) · U unverified”; the figure “where Syntology's instrument failed” counts failures of Syntology's instrument, not of the code. When the archive marks a repository official for the paper, the line starts with that repository's state (the archive's flag, not a verdict on who wrote the code); hover it for the repositories the samples that ran came from. Abstracts are on each paper's page.

• Open Source Infrastructure for Automatic Cell Segmentation
  12 Sep 2024 0 repositories listed
• Diffusion-driven lensless fiber endomicroscopic quantitative phase imaging towards digital pathology
  26 Jul 2024 0 repositories listed
• Artificial Immunofluorescence in a Flash: Rapid Synthetic Imaging from Brightfield Through Residual Diffusion
  25 Jul 2024 0 repositories listed
• Enhancing Cell Instance Segmentation in Scanning Electron Microscopy Images via a Deep Contour Closing Operator
  22 Jul 2024 0 repositories listed
• Deep asymmetric mixture model for unsupervised cell segmentation
  3 Jun 2024 0 repositories listed
• Prior-guided Diffusion Model for Cell Segmentation in Quantitative Phase Imaging
  10 May 2024 0 repositories listed
• Active Learning Enabled Low-cost Cell Image Segmentation Using Bounding Box Annotation
  2 May 2024 0 repositories listed
• Practical Guidelines for Cell Segmentation Models Under Optical Aberrations in Microscopy
  12 Apr 2024 0 repositories listed
• Deep Learning Segmentation and Classification of Red Blood Cells Using a Large Multi-Scanner Dataset
  27 Mar 2024 0 repositories listed
• StainDiffuser: MultiTask Dual Diffusion Model for Virtual Staining
  17 Mar 2024 0 repositories listed
• Pushing the limits of cell segmentation models for imaging mass cytometry
  6 Feb 2024 0 repositories listed
• FDNet: Frequency Domain Denoising Network For Cell Segmentation in Astrocytes Derived From Induced Pluripotent Stem Cells
  5 Feb 2024 0 repositories listed
• Morphological Profiling for Drug Discovery in the Era of Deep Learning
  13 Dec 2023 0 repositories listed
• CellMixer: Annotation-free Semantic Cell Segmentation of Heterogeneous Cell Populations
  1 Dec 2023 0 repositories listed
• Denoising Diffusion Probabilistic Models for Image Inpainting of Cell Distributions in the Human Brain
  28 Nov 2023 0 repositories listed
• A Foundation Model for Cell Segmentation
  18 Nov 2023 0 repositories listed
• Defining the boundaries: challenges and advances in identifying cells in microscopy images
  14 Nov 2023 0 repositories listed
• DistNet2D: Leveraging long-range temporal information for efficient segmentation and tracking
  30 Oct 2023 0 repositories listed
• CUPre: Cross-domain Unsupervised Pre-training for Few-Shot Cell Segmentation
  6 Oct 2023 0 repositories listed
• Attention De-sparsification Matters: Inducing Diversity in Digital Pathology Representation Learning
  12 Sep 2023 0 repositories listed
• Semi-supervised Instance Segmentation with a Learned Shape Prior
  9 Sep 2023 0 repositories listed
• The Multi-modality Cell Segmentation Challenge: Towards Universal Solutions
  10 Aug 2023 0 repositories listed
• Impact of Image Compression on In Vitro Cell Migration Analysis
  4 May 2023 0 repositories listed
• Advanced Multi-Microscopic Views Cell Semi-supervised Segmentation
  21 Mar 2023 0 repositories listed
• SpaceTx: A Roadmap for Benchmarking Spatial Transcriptomics Exploration of the Brain
  20 Jan 2023 0 repositories listed
• Double U-Net for Super-Resolution and Segmentation of Live Cell Images
  5 Dec 2022 0 repositories listed
• Learning Melanocytic Cell Masks from Adjacent Stained Tissue
  1 Nov 2022 0 repositories listed
• Scale Equivariant U-Net
  10 Oct 2022 0 repositories listed
• Automated Characterization of Catalytically Active Inclusion Body Production in Biotechnological Screening Systems
  30 Sep 2022 0 repositories listed
• Adversarial Stain Transfer to Study the Effect of Color Variation on Cell Instance Segmentation
  1 Sep 2022 0 repositories listed
• Edge-Based Self-Supervision for Semi-Supervised Few-Shot Microscopy Image Cell Segmentation
  3 Aug 2022 0 repositories listed
• Point2Mask: A Weakly Supervised Approach for Cell Segmentation Using Point Annotation
  25 Jul 2022 0 repositories listed
• A hybrid multi-object segmentation framework with model-based B-splines for microbial single cell analysis
  3 May 2022 0 repositories listed
• Self-distillation Augmented Masked Autoencoders for Histopathological Image Classification
  31 Mar 2022 0 repositories listed
• Differentiable Microscopy for Content and Task Aware Compressive Fluorescence Imaging
  28 Mar 2022 0 repositories listed
• Cell segmentation from telecentric bright-field transmitted light microscopy images using a Residual Attention U-Net: a case study on HeLa line
  23 Mar 2022 0 repositories listed
• Improved cell segmentation using deep learning in label-free optical microscopy images
  8 Sep 2021 0 repositories listed
• Unsupervised Domain Adaptation for the Histopathological Cell Segmentation through Self-Ensembling
  20 Jul 2021 0 repositories listed
• DeepCeNS: An end-to-end Pipeline for Cell and Nucleus Segmentation in Microscopic Images
  18 Jul 2021 0 repositories listed
• A Multi-Branch Hybrid Transformer Networkfor Corneal Endothelial Cell Segmentation
  21 May 2021 0 repositories listed
• An Efficient Blood-Cell Segmentation for the Detection of Hematological Disorders
  18 Mar 2021 0 repositories listed
• DeepCervix: A Deep Learning-based Framework for the Classification of Cervical Cells Using Hybrid Deep Feature Fusion Techniques
  24 Feb 2021 0 repositories listed
• Accurate Cell Segmentation in Digital Pathology Images via Attention Enforced Networks
  14 Dec 2020 0 repositories listed
• Spherical Harmonics for Shape-Constrained 3D Cell Segmentation
  23 Oct 2020 0 repositories listed
• CellCycleGAN: Spatiotemporal Microscopy Image Synthesis of Cell Populations using Statistical Shape Models and Conditional GANs
  22 Oct 2020 0 repositories listed
• Quantifying the effect of image compression on supervised learning applications in optical microscopy
  26 Sep 2020 0 repositories listed
• Learning to segment clustered amoeboid cells from brightfield microscopy via multi-task learning with adaptive weight selection
  19 May 2020 0 repositories listed
• EVICAN-a balanced dataset for algorithm development in cell and nucleus segmentation
  27 Mar 2020 0 repositories listed
• Adversarial Domain Adaptation for Cell Segmentation
  29 Jan 2020 0 repositories listed
• Robust Method for Semantic Segmentation of Whole-Slide Blood Cell Microscopic Image
  28 Jan 2020 0 repositories listed
• A Novel Automation-Assisted Cervical Cancer Reading Method Based on Convolutional Neural Network
  14 Dec 2019 0 repositories listed
• Weakly Supervised Multi-Task Learning for Cell Detection and Segmentation
  27 Oct 2019 0 repositories listed
• Comparing Deep Learning Models for Multi-cell Classification in Liquid-based Cervical Cytology Images
  2 Oct 2019 0 repositories listed
• End-to-end learning of pharmacological assays from high-resolution microscopy images
  1 May 2019 0 repositories listed
• Learn to segment single cells with deep distance estimator and deep cell detector
  23 Apr 2019 0 repositories listed
• Algorithms used for the Cell Segmentation Benchmark Competition at ISBI 2019 by RWTH-GE
  15 Apr 2019 0 repositories listed
• QANet -- Quality Assurance Network for Image Segmentation
  9 Apr 2019 0 repositories listed
• An Efficient Approach for Cell Segmentation in Phase Contrast Microscopy Images
  31 Mar 2019 0 repositories listed
• Robust neural circuit reconstruction from serial electron microscopy with convolutional recurrent networks
  28 Nov 2018 0 repositories listed
• Neural Stain Normalization and Unsupervised Classification of Cell Nuclei in Histopathological Breast Cancer Images
  9 Nov 2018 0 repositories listed
• Algorithms for screening of Cervical Cancer: A chronological review
  2 Nov 2018 0 repositories listed
• CNN-based Preprocessing to Optimize Watershed-based Cell Segmentation in 3D Confocal Microscopy Images
  16 Oct 2018 0 repositories listed
• Conditional Generative Refinement Adversarial Networks for Unbalanced Medical Image Semantic Segmentation
  9 Oct 2018 0 repositories listed
• Panoptic Segmentation with an End-to-End Cell R-CNN for Pathology Image Analysis
  28 Sep 2018 0 repositories listed
• Nuclei Detection Using Mixture Density Networks
  22 Aug 2018 0 repositories listed
• Segmentation of Microscopy Data for finding Nuclei in Divergent Images
  19 Aug 2018 0 repositories listed
• DeepSDCS: Dissecting cancer proliferation heterogeneity in Ki67 digital whole slide images
  28 Jun 2018 0 repositories listed
• Three-Dimensional GPU-Accelerated Active Contours for Automated Localization of Cells in Large Images
  17 Apr 2018 0 repositories listed
• SEGMENT3D: A Web-based Application for Collaborative Segmentation of 3D images used in the Shoot Apical Meristem
  26 Oct 2017 0 repositories listed
• Image Segmentation and Classification for Sickle Cell Disease using Deformable U-Net
  23 Oct 2017 0 repositories listed
• Cell Segmentation in 3D Confocal Images using Supervoxel Merge-Forests with CNN-based Hypothesis Selection
  18 Oct 2017 0 repositories listed
• SHADHO: Massively Scalable Hardware-Aware Distributed Hyperparameter Optimization
  5 Jul 2017 0 repositories listed
• The Candidate Multi-Cut for Cell Segmentation
  4 Jul 2017 0 repositories listed
• Reconstructing the Forest of Lineage Trees of Diverse Bacterial Communities Using Bio-inspired Image Analysis
  22 Jun 2017 0 repositories listed
• Efficient Pose and Cell Segmentation using Column Generation
  1 Dec 2016 0 repositories listed
• Cell segmentation with random ferns and graph-cuts
  17 Feb 2016 0 repositories listed
• Unsupervised Segmentation of Overlapping Cervical Cell Cytoplasm
  21 May 2015 0 repositories listed
• Segmentation of Clustered Nuclei With Shape Markers and Marking Function
  15 Apr 2009 0 repositories listed