Papers › Yucca: A Deep Learning Framework For Medical Image Analysis

Yucca: A Deep Learning Framework For Medical Image Analysis

29 Jul 2024arXiv:2407.19888archive 2025-07-28

Sebastian Nørgaard Llambias, Julia Machnio, Asbjørn Munk, Jakob Ambsdorf, Mads Nielsen, Mostafa Mehdipour Ghazi

Medical image analysis using deep learning frameworks has advanced healthcare by automating complex tasks, but many existing frameworks lack flexibility, modularity, and user-friendliness. To address these challenges, we introduce Yucca, an open-source AI framework available at https://github.com/Sllambias/yucca, designed specifically for medical imaging applications and built on PyTorch and PyTorch Lightning. Yucca features a three-tiered architecture: Functional, Modules, and Pipeline, providing a comprehensive and customizable solution. Evaluated across diverse tasks such as cerebral microbleeds detection, white matter hyperintensity segmentation, and hippocampus segmentation, Yucca achieves state-of-the-art results, demonstrating its robustness and versatility. Yucca offers a powerful, flexible, and user-friendly platform for medical image analysis, inviting community contributions to advance its capabilities and impact.

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Deep LearningMedical Image AnalysisSegmentation

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