Papers › Unbalanced Sobolev Descent

Unbalanced Sobolev Descent

29 Sep 2020NeurIPS 2020 12arXiv:2009.14148archive 2025-07-28

Youssef Mroueh, Mattia Rigotti

We introduce Unbalanced Sobolev Descent (USD), a particle descent algorithm for transporting a high dimensional source distribution to a target distribution that does not necessarily have the same mass. We define the Sobolev-Fisher discrepancy between distributions and show that it relates to advection-reaction transport equations and the Wasserstein-Fisher-Rao metric between distributions. USD transports particles along gradient flows of the witness function of the Sobolev-Fisher discrepancy (advection step) and reweighs the mass of particles with respect to this witness function (reaction step). The reaction step can be thought of as a birth-death process of the particles with rate of growth proportional to the witness function. When the Sobolev-Fisher witness function is estimated in a Reproducing Kernel Hilbert Space (RKHS), under mild assumptions we show that USD converges asymptotically (in the limit of infinite particles) to the target distribution in the Maximum Mean Discrepancy (MMD) sense. We then give two methods to estimate the Sobolev-Fisher witness with neural networks, resulting in two Neural USD algorithms. The first one implements the reaction step with mirror descent on the weights, while the second implements it through a birth-death process of particles. We show on synthetic examples that USD transports distributions with or without conservation of mass faster than previous particle descent algorithms, and finally demonstrate its use for molecular biology analyses where our method is naturally suited to match developmental stages of populations of differentiating cells based on their single-cell RNA sequencing profile. Code is available at https://github.com/ibm/usd .

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D_forward_weights IBM/USD/unbalanced_descent.py official repository ran · our draft was wrong Apache-2.0 (permissive) · 666b93c844016302 · report
MMD_RFF IBM/USD/unbalanced_descent.py official repository ran Apache-2.0 (permissive) · a74a618e9386ec3d · report
RFFEmbedding IBM/USD/unbalanced_descent.py official repository ran Apache-2.0 (permissive) · 7b1e4a57e169fde5 · report
get_loader IBM/USD/unbalanced_descent.py official repository ran · our draft was wrong Apache-2.0 (permissive) · 1beaa0f96fbe0db6 · report
minibatch IBM/USD/unbalanced_descent.py official repository ran · our draft was wrong Apache-2.0 (permissive) · 194fa2394685944b · report
describe_data ibm/usd/datasets.py official repository unverified Apache-2.0 (permissive) · 535e52d7bda9b841 · report
get_devices ibm/usd/utils.py official repository unverified Apache-2.0 (permissive) · 290087b87df2ac2e · report
load_img ibm/usd/datasets.py official repository unverified Apache-2.0 (permissive) · 5912b3a04cff8c04 · report
load_weights ibm/usd/datasets.py official repository unverified Apache-2.0 (permissive) · 82adb6728cac0e04 · report
log_to_dict ibm/usd/utils.py official repository unverified Apache-2.0 (permissive) · 88a867cdff5a2e0b · report
make_data_parallel ibm/usd/utils.py official repository unverified Apache-2.0 (permissive) · 0b8190dcac4fd585 · report
manual_sgd_ IBM/USD/unbalanced_descent.py official repository unverified Apache-2.0 (permissive) · 13c848a877c3681a · report
sparsemax ibm/usd/modules.py official repository unverified Apache-2.0 (permissive) · 8ae5e6dfcb32482c · report
swish ibm/usd/modules.py official repository unverified Apache-2.0 (permissive) · fc3718baf8f65341 · report
train_unbalanced_descent IBM/USD/unbalanced_descent.py official repository unverified Apache-2.0 (permissive) · debaae28c8c3b426 · report

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