Papers › Transfer Learning in Polyp and Endoscopic Tool Segmentation from Colonoscopy Images

Transfer Learning in Polyp and Endoscopic Tool Segmentation from Colonoscopy Images

16 Nov 2021Nordic Machine Intelligence 2021 11archive 2025-07-28

Nefeli Panagiota Tzavara, Bjørn-Jostein Singstad

Colorectal cancer is one of the deadliest and most widespread types of cancer in the world. Colonoscopy is the procedure used to detect and diagnose polyps from the colon, but today's detection rate shows a significant error rate that affects diagnosis and treatment. An automatic image segmentation algorithm may help doctors to improve the detection rate of pathological polyps in the colon. Furthermore, segmenting endoscopic tools in images taken during colonoscopy may contribute towards robotic assisted surgery. In this study, we trained and validated both pre-trained and not pre-trained segmentation models on two different data sets, containing images of polyps and endoscopic tools. Finally, we applied the models on two separate test sets and the best polyp model got a dice score 0.857 and the test instrument model got a dice score 0.948. Moreover, we found that pre-training of the models increased the performance in segmenting polyps and endoscopic tools.

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Tasks

Image SegmentationMedical Image SegmentationSegmentationSemantic SegmentationTransfer Learning

Results from the paper archive 2025-07-28

TaskDatasetModelMetricValueRank at snapshotLeaderboardReport
Medical Image Segmentation Hyper-Kvasir Dataset efficientnetb1 Dice score 0.857 #1 of 1 Archive leaderboard report
Medical Image Segmentation Hyper-Kvasir Dataset efficientnetb1 Intersection over Union 0.800 #1 of 1 Archive leaderboard report
Medical Image Segmentation Kvasir-Instrument efficientnetb1 DSC 0.948 #1 of 3 Archive leaderboard report
Medical Image Segmentation Kvasir-Instrument efficientnetb1 Dice Score 0.948 #1 of 3 Archive leaderboard report
Medical Image Segmentation Kvasir-Instrument efficientnetb1 Intersection over Union 0.911 #1 of 3 Archive leaderboard report

Ranks are positions in the archive's leaderboards as they stood at the 2025-07-28 snapshot. Results published since then are not among these rows, so a rank here is not a current standing.

Methods

Concatenated Skip ConnectionConvolutionEfficientNetMax PoolingReLUU-Net

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