Papers › Neural Jump Ordinary Differential Equations: Consistent Continuous-Time Prediction and...

Neural Jump Ordinary Differential Equations: Consistent Continuous-Time Prediction and Filtering

8 Jun 2020ICLR 2021 1arXiv:2006.04727archive 2025-07-28

Calypso Herrera, Florian Krach, Josef Teichmann

Combinations of neural ODEs with recurrent neural networks (RNN), like GRU-ODE-Bayes or ODE-RNN are well suited to model irregularly observed time series. While those models outperform existing discrete-time approaches, no theoretical guarantees for their predictive capabilities are available. Assuming that the irregularly-sampled time series data originates from a continuous stochastic process, the L²-optimal online prediction is the conditional expectation given the currently available information. We introduce the Neural Jump ODE (NJ-ODE) that provides a data-driven approach to learn, continuously in time, the conditional expectation of a stochastic process. Our approach models the conditional expectation between two observations with a neural ODE and jumps whenever a new observation is made. We define a novel training framework, which allows us to prove theoretical guarantees for the first time. In particular, we show that the output of our model converges to the L²-optimal prediction. This can be interpreted as solution to a special filtering problem. We provide experiments showing that the theoretical results also hold empirically. Moreover, we experimentally show that our model outperforms the baselines in more complex learning tasks and give comparisons on real-world datasets.

PaperPDFConference PDFCodeCode Syntology ran

In Syntology Open this paper in Syntology's Atlas, the map of the papers in Syntology's graph and their citations.

For agents, Syntology's MCP tool lists every function and class Syntology harvested from this paper and whether it ran (how to connect): get_harvested_code_for_paper(arxiv_id="2006.04727")

Code

Syntology Ran 4 of 21 code samples harvested from 2 repositories linked to this paper; 17 have no recorded run. Of those that ran: 2 ran · our draft was wrong; 1 ran · fixture could not drive it; 1 ran with no contract checked.

By repository: official repository: 21 samples from 2 repositories, 4 ran. The run record, sample by sample. “Ran” means executed on a synthesized input, not that the code is correct or reproduces the paper.

HerreraKrachTeichmann/ControlledODERNN officialmentioned in papermentioned on GitHubpytorchMIT report
HerreraKrachTeichmann/NJODE officialmentioned in papermentioned on GitHubpytorch report

Repository list and official/mentioned flags are the archive's, frozen 2025-07-28. Reachability, where shown, is from one Syntology probe window (2026-09-16 to 2026-09-18); repositories not probed show nothing. GitHub stars are not tracked.

Code Syntology ran Syntology

21 samples harvested; 4 ran; 0 honoured the contract we drafted; 17 have no recorded run. Read from Syntology's graph 2026-09-24; that is when this build read the record, not when the samples ran.

2ran · our draft was wrong
1ran · fixture could not drive it
1ran
17unverified

Licence: 0 of the 21 samples are pointer only, meaning Syntology does not serve that copy's text. This page shows no code text for any sample; each one links to its file in the repository.

Harvested from 2 repositories linked to this paper, official or community; each sample names its own and says which. “Ran” means the sample executed on a synthesized input. It does not mean the output is correct, and nothing here reproduces the paper's results. “Honoured” and “violated” refer to a contract Syntology drafted from the code itself; “our draft was wrong” and “fixture could not drive it” are failures of Syntology's instrument, not of the code.

Each sample ends with its code_sha256, Syntology's identity for that exact code. An agent fetches the stored sample with Syntology's MCP tool get_code(code_sha256="…") (how to connect); click an identity to copy that call.

Repository labels, per sample. official repository: The archive marks this repository official for the paper. named in the paper: The archive records that the paper mentions this repository; it is not marked official. community (archive-listed): In the archive's code links for this paper, not marked official and not recorded as mentioned in the paper. found in paper text by Syntology: Syntology found this repository in the paper's own text; whether it is the authors' implementation is not asserted. community: Not in the archive's code links for this paper; a community repository Syntology harvested. Samples from a repository marked official are listed first. Licence labels name the repository's licence as recorded at harvest. “Pointer only” means Syntology does not serve that copy's text, for one of four reasons: no licence file was found; the licence was not identified; the licence is recorded as permissive but that copy's record is not marked cleared; or the licence is outside the permissive list Syntology serves text under (MIT, Apache-2.0, BSD and similar). Some licences outside that list permit redistribution, such as WTFPL, and GPL-3.0 under its conditions; they are simply not on the list. Hover a licence label for the reason. File links open the file on GitHub at the default branch, which may have changed since the harvest.

compute_KL_loss HerreraKrachTeichmann/ControlledODERNN/GRU_ODE_Bayes/models_gru_ode_bayes.py official repository ran · fixture could not drive it fingerprinted MIT (permissive) · 3538a026b3686dc4 · report
gaussian_KL HerreraKrachTeichmann/ControlledODERNN/GRU_ODE_Bayes/models_gru_ode_bayes.py official repository ran · our draft was wrong fingerprinted MIT (permissive) · d7007fe42b0a49b2 · report
get_data_min_max HerreraKrachTeichmann/ControlledODERNN/latent_ODE/physionet_LODE.py official repository ran MIT (permissive) · 97cefd1ecd9fcbca · report
get_parameter_array HerreraKrachTeichmann/NJODE/NJODE/parallel_train.py official repository ran · our draft was wrong MIT (permissive) · 6199bec38ce9b0bb · report
add_jitter HerreraKrachTeichmann/ControlledODERNN/GRU_ODE_Bayes/data_utils_gru_ode_bayes.py official repository unverified MIT (permissive) · 05fb630e81f73dab · report
compute_binary_CE_loss HerreraKrachTeichmann/ControlledODERNN/latent_ODE/likelihood_eval_LODE.py official repository unverified MIT (permissive) · c9b91f3a93d08f8c · report
compute_loss HerreraKrachTeichmann/ControlledODERNN/NJODE/models.py official repository unverified MIT (permissive) · 12d22dac3d5ee45c · report
compute_loss_2 HerreraKrachTeichmann/ControlledODERNN/NJODE/models.py official repository unverified MIT (permissive) · b5eeaff03e06c051 · report
custom_collate_fn HerreraKrachTeichmann/ControlledODERNN/GRU_ODE_Bayes/data_utils_gru_ode_bayes.py official repository unverified MIT (permissive) · 4039617eeaf62d4e · report
evaluate_model HerreraKrachTeichmann/ControlledODERNN/NJODE/physionet_train.py official repository unverified MIT (permissive) · e7c9692657b50119 · report
evaluate_model HerreraKrachTeichmann/ControlledODERNN/NJODE/climate_train.py official repository unverified MIT (permissive) · 172c6c49b142f584 · report
gaussian_log_likelihood HerreraKrachTeichmann/ControlledODERNN/latent_ODE/likelihood_eval_LODE.py official repository unverified MIT (permissive) · bd43eff2ee1d2449 · report
get_comparison_times_ind HerreraKrachTeichmann/ControlledODERNN/NJODE/physionet_train.py official repository unverified MIT (permissive) · dd7dc3c87b389bb1 · report
get_ffnn HerreraKrachTeichmann/ControlledODERNN/NJODE/models.py official repository unverified MIT (permissive) · ac269034a4dc74f2 · report
load_metadata HerreraKrachTeichmann/ControlledODERNN/NJODE/data_utils.py official repository unverified MIT (permissive) · a809ed2bcb40ac31 · report
parse_datasets HerreraKrachTeichmann/ControlledODERNN/latent_ODE/parse_datasets_LODE.py official repository unverified MIT (permissive) · 19750a398c51a677 · report
plot_paths_from_checkpoint HerreraKrachTeichmann/ControlledODERNN/NJODE/extras.py official repository unverified MIT (permissive) · fa93c9ef59f86197 · report
poisson_log_likelihood HerreraKrachTeichmann/ControlledODERNN/latent_ODE/likelihood_eval_LODE.py official repository unverified MIT (permissive) · 8cefc622fcbe2f88 · report
seq_collate_fn HerreraKrachTeichmann/ControlledODERNN/GRU_ODE_Bayes/data_utils_gru_ode_bayes.py official repository unverified MIT (permissive) · c133d40e18cb7828 · report
variable_time_collate_fn HerreraKrachTeichmann/ControlledODERNN/latent_ODE/physionet_LODE.py official repository unverified MIT (permissive) · 77d551e089ce5d29 · report
variable_time_collate_fn1 HerreraKrachTeichmann/ControlledODERNN/latent_ODE/physionet_LODE.py official repository unverified MIT (permissive) · 82d3648c208e37cf · report

Tasks

Time SeriesTime Series Analysis

Results from the paper archive 2025-07-28

No leaderboard rows for this paper in the archive.

Report a problem or propose a change · a person checks every report against the paper or source before anything changes; decisions are listed on /corrections