Papers › The interventional Bayesian Gaussian equivalent score for Bayesian causal inference...
The interventional Bayesian Gaussian equivalent score for Bayesian causal inference with unknown soft interventions
Jack Kuipers, Giusi Moffa
Describing the causal relations governing a system is a fundamental task in many scientific fields, ideally addressed by experimental studies. However, obtaining data under intervention scenarios may not always be feasible, while discovering causal relations from purely observational data is notoriously challenging. In certain settings, such as genomics, we may have data from heterogeneous study conditions, with soft (partial) interventions only pertaining to a subset of the study variables, whose effects and targets are possibly unknown. Combining data from experimental and observational studies offers the opportunity to leverage both domains and improve on the identifiability of causal structures. To this end, we define the interventional BGe score for a mixture of observational and interventional data, where the targets and effects of intervention may be unknown. To demonstrate the approach we compare its performance to other state-of-the-art algorithms, both in simulations and data analysis applications. Prerogative of our method is that it takes a Bayesian perspective leading to a full characterisation of the posterior distribution of the DAG structures. Given a sample of DAGs one can also automatically derive full posterior distributions of the intervention effects. Consequently the method effectively captures the uncertainty both in the structure and the parameter estimates. Codes to reproduce the simulations and analyses are publicly available at github.com/jackkuipers/iBGe
In Syntology Open this paper in Syntology's Atlas, the map of the papers in Syntology's graph and their citations.
Code
Repository list and official/mentioned flags are the archive's, frozen 2025-07-28. Reachability, where shown, is from one Syntology probe window (2026-09-16 to 2026-09-18); repositories not probed show nothing. GitHub stars are not tracked.
Code Syntology ran Syntology
Not run by Syntology. Nothing on this page verifies that the listed code works.
Tasks
Results from the paper archive 2025-07-28
No leaderboard rows for this paper in the archive.
Report a problem or propose a change · a person checks every report against the paper or source before anything changes; decisions are listed on /corrections