Papers › Testing Directed Acyclic Graph via Structural, Supervised and Generative Adversarial Learning

Testing Directed Acyclic Graph via Structural, Supervised and Generative Adversarial Learning

2 Jun 2021arXiv:2106.01474archive 2025-07-28

Chengchun Shi, Yunzhe Zhou, Lexin Li

In this article, we propose a new hypothesis testing method for directed acyclic graph (DAG). While there is a rich class of DAG estimation methods, there is a relative paucity of DAG inference solutions. Moreover, the existing methods often impose some specific model structures such as linear models or additive models, and assume independent data observations. Our proposed test instead allows the associations among the random variables to be nonlinear and the data to be time-dependent. We build the test based on some highly flexible neural networks learners. We establish the asymptotic guarantees of the test, while allowing either the number of subjects or the number of time points for each subject to diverge to infinity. We demonstrate the efficacy of the test through simulations and a brain connectivity network analysis.

PaperPDFCodeCode Syntology ran

In Syntology Open this paper in Syntology's Atlas, the map of the papers in Syntology's graph and their citations.

For agents, Syntology's MCP tool lists every function and class Syntology harvested from this paper and whether it ran (how to connect): get_harvested_code_for_paper(arxiv_id="2106.01474")

Code

Syntology Ran 3 of 19 code samples harvested from 1 repository linked to this paper; 16 have no recorded run. Of those that ran: 1 ran · violated contract; 1 ran · our draft was wrong; 1 ran · fixture could not drive it.

By repository: official repository: 19 samples from 1 repository, 3 ran. The run record, sample by sample. “Ran” means executed on a synthesized input, not that the code is correct or reproduces the paper.

yunzhe-zhou/sugar officialmentioned in papermentioned on GitHubtfMIT report

Repository list and official/mentioned flags are the archive's, frozen 2025-07-28. Reachability, where shown, is from one Syntology probe window (2026-09-16 to 2026-09-18); repositories not probed show nothing. GitHub stars are not tracked.

Code Syntology ran Syntology

19 samples harvested; 3 ran; 0 honoured the contract we drafted; 16 have no recorded run. Read from Syntology's graph 2026-09-24; that is when this build read the record, not when the samples ran.

1ran · violated contract
1ran · our draft was wrong
1ran · fixture could not drive it
16unverified

Licence: 0 of the 19 samples are pointer only, meaning Syntology does not serve that copy's text. This page shows no code text for any sample; each one links to its file in the repository.

Harvested from yunzhe-zhou/sugar. “Ran” means the sample executed on a synthesized input. It does not mean the output is correct, and nothing here reproduces the paper's results. “Honoured” and “violated” refer to a contract Syntology drafted from the code itself; “our draft was wrong” and “fixture could not drive it” are failures of Syntology's instrument, not of the code.

Each sample ends with its code_sha256, Syntology's identity for that exact code. An agent fetches the stored sample with Syntology's MCP tool get_code(code_sha256="…") (how to connect); click an identity to copy that call.

Repository labels, per sample. official repository: The archive marks this repository official for the paper. named in the paper: The archive records that the paper mentions this repository; it is not marked official. community (archive-listed): In the archive's code links for this paper, not marked official and not recorded as mentioned in the paper. found in paper text by Syntology: Syntology found this repository in the paper's own text; whether it is the authors' implementation is not asserted. community: Not in the archive's code links for this paper; a community repository Syntology harvested. Samples from a repository marked official are listed first. Licence labels name the repository's licence as recorded at harvest. “Pointer only” means Syntology does not serve that copy's text, for one of four reasons: no licence file was found; the licence was not identified; the licence is recorded as permissive but that copy's record is not marked cleared; or the licence is outside the permissive list Syntology serves text under (MIT, Apache-2.0, BSD and similar). Some licences outside that list permit redistribution, such as WTFPL, and GPL-3.0 under its conditions; they are simply not on the list. Hover a licence label for the reason. File links open the file on GitHub at the default branch, which may have changed since the harvest.

is_dag yunzhe-zhou/sugar/SUGAR/utils.py official repository ran · violated contract MIT (permissive) · 786b48473c9f4aec · report
simulate_parameter yunzhe-zhou/sugar/SUGAR/utils.py official repository ran · fixture could not drive it MIT (permissive) · 2a4605e98eb5ad15 · report
squared_loss yunzhe-zhou/sugar/SUGAR/nonlinear_learning.py official repository ran · our draft was wrong fingerprinted MIT (permissive) · c60cc034e8957e26 · report
cal_graph yunzhe-zhou/sugar/SUGAR/inference.py official repository unverified MIT (permissive) · dcd4088afc50523b · report
cal_pvalue yunzhe-zhou/sugar/SUGAR/inference.py official repository unverified MIT (permissive) · a35fbfea327c18f8 · report
cal_pvalue_real yunzhe-zhou/sugar/SUGAR/real_infer.py official repository unverified MIT (permissive) · c2475dc70e8074ff · report
calculate_interaction_graph_real yunzhe-zhou/sugar/SUGAR/real_infer.py official repository unverified MIT (permissive) · 26ffc0d6eabee6c5 · report
condition yunzhe-zhou/sugar/SUGAR/gan_utils.py official repository unverified MIT (permissive) · 58df37e812374105 · report
cost_xy yunzhe-zhou/sugar/SUGAR/gan_utils.py official repository unverified MIT (permissive) · 17fb6cd086ef2f71 · report
generate_W yunzhe-zhou/sugar/SUGAR/synthetic.py official repository unverified MIT (permissive) · 1b4fe9f50c07208f · report
get_edges yunzhe-zhou/sugar/SUGAR/sim_gen.py official repository unverified MIT (permissive) · 2af3fa1a257acf4d · report
index_to_graph yunzhe-zhou/sugar/SUGAR/infer_utils.py official repository unverified MIT (permissive) · b44efa1895a3bbe9 · report
print_real yunzhe-zhou/sugar/SUGAR/real_infer.py official repository unverified MIT (permissive) · ab74da99a9e8cbc9 · report
root_relationship yunzhe-zhou/sugar/SUGAR/infer_utils.py official repository unverified MIT (permissive) · 535af2319646dd89 · report
root_relationship_all yunzhe-zhou/sugar/SUGAR/infer_utils.py official repository unverified MIT (permissive) · 7be108bf73c0e733 · report
sim_gen yunzhe-zhou/sugar/SUGAR/sim_gen.py official repository unverified MIT (permissive) · 4f680dea088e57d2 · report
simulate_dag yunzhe-zhou/sugar/SUGAR/utils.py official repository unverified MIT (permissive) · 35486488c2030882 · report
struct_learn yunzhe-zhou/sugar/SUGAR/inference.py official repository unverified MIT (permissive) · 43962fca77e3b596 · report
write_to_row yunzhe-zhou/sugar/SUGAR/gan_utils.py official repository unverified MIT (permissive) · c75aad8da750f62c · report

Tasks

Additive models

Results from the paper archive 2025-07-28

No leaderboard rows for this paper in the archive.

Report a problem or propose a change · a person checks every report against the paper or source before anything changes; decisions are listed on /corrections