Papers › Space Group Informed Transformer for Crystalline Materials Generation

Space Group Informed Transformer for Crystalline Materials Generation

23 Mar 2024arXiv:2403.15734archive 2025-07-28

Zhendong Cao, Xiaoshan Luo, Jian Lv, Lei Wang

We introduce CrystalFormer, a transformer-based autoregressive model specifically designed for space group-controlled generation of crystalline materials. The incorporation of space group symmetry significantly simplifies the crystal space, which is crucial for data and compute efficient generative modeling of crystalline materials. Leveraging the prominent discrete and sequential nature of the Wyckoff positions, CrystalFormer learns to generate crystals by directly predicting the species and locations of symmetry-inequivalent atoms in the unit cell. We demonstrate the advantages of CrystalFormer in standard tasks such as symmetric structure initialization and element substitution compared to conventional methods implemented in popular crystal structure prediction software. Moreover, we showcase the application of CrystalFormer of property-guided materials design in a plug-and-play manner. Our analysis shows that CrystalFormer ingests sensible solid-state chemistry knowledge and heuristics by compressing the material dataset, thus enabling systematic exploration of crystalline materials. The simplicity, generality, and flexibility of CrystalFormer position it as a promising architecture to be the foundational model of the entire crystalline materials space, heralding a new era in materials modeling and discovery.

PaperPDFCodeCode Syntology ran

In Syntology Open this paper in Syntology's Atlas, the map of the papers in Syntology's graph and their citations.

For agents, Syntology's MCP tool lists every function and class Syntology harvested from this paper and whether it ran (how to connect): get_harvested_code_for_paper(arxiv_id="2403.15734")

Code

Syntology Ran 2 of 3 code samples harvested from 1 repository linked to this paper; 1 has no recorded run. Of those that ran: 1 ran · honoured contract; 1 ran · violated contract.

By repository: official repository: 3 samples from 1 repository, 2 ran. The run record, sample by sample. “Ran” means executed on a synthesized input, not that the code is correct or reproduces the paper.

deepmodeling/crystalformer officialmentioned in papermentioned on GitHubjax report

Repository list and official/mentioned flags are the archive's, frozen 2025-07-28. Reachability, where shown, is from one Syntology probe window (2026-09-16 to 2026-09-18); repositories not probed show nothing. GitHub stars are not tracked.

Code Syntology ran Syntology

3 samples harvested; 2 ran; 1 honoured the contract we drafted; 1 has no recorded run. Read from Syntology's graph 2026-09-24; that is when this build read the record, not when the samples ran.

1ran · honoured contract
1ran · violated contract
1unverified

Licence: 0 of the 3 samples are pointer only, meaning Syntology does not serve that copy's text. This page shows no code text for any sample; each one links to its file in the repository.

Harvested from deepmodeling/crystalformer. “Ran” means the sample executed on a synthesized input. It does not mean the output is correct, and nothing here reproduces the paper's results. “Honoured” and “violated” refer to a contract Syntology drafted from the code itself; “our draft was wrong” and “fixture could not drive it” are failures of Syntology's instrument, not of the code.

Each sample ends with its code_sha256, Syntology's identity for that exact code. An agent fetches the stored sample with Syntology's MCP tool get_code(code_sha256="…") (how to connect); click an identity to copy that call.

Repository labels, per sample. official repository: The archive marks this repository official for the paper. named in the paper: The archive records that the paper mentions this repository; it is not marked official. community (archive-listed): In the archive's code links for this paper, not marked official and not recorded as mentioned in the paper. found in paper text by Syntology: Syntology found this repository in the paper's own text; whether it is the authors' implementation is not asserted. community: Not in the archive's code links for this paper; a community repository Syntology harvested. Samples from a repository marked official are listed first. Licence labels name the repository's licence as recorded at harvest. “Pointer only” means Syntology does not serve that copy's text, for one of four reasons: no licence file was found; the licence was not identified; the licence is recorded as permissive but that copy's record is not marked cleared; or the licence is outside the permissive list Syntology serves text under (MIT, Apache-2.0, BSD and similar). Some licences outside that list permit redistribution, such as WTFPL, and GPL-3.0 under its conditions; they are simply not on the list. Hover a licence label for the reason. File links open the file on GitHub at the default branch, which may have changed since the harvest.

get_labels deepmodeling/crystalformer/crystalformer/cli/classifier.py official repository ran · honoured contract Apache-2.0 (permissive) · b0661134b5b6db88 · report
structure_validity deepmodeling/crystalformer/scripts/eval_utils.py official repository ran · violated contract Apache-2.0 (permissive) · f71c119a2b7edc07 · report
GLXYZAW_from_sample deepmodeling/crystalformer/crystalformer/cli/classifier.py official repository unverified Apache-2.0 (permissive) · 52927c8d9d88b5d5 · report

Results from the paper archive 2025-07-28

No leaderboard rows for this paper in the archive.

Report a problem or propose a change · a person checks every report against the paper or source before anything changes; decisions are listed on /corrections