Papers › Simultaneous Matrix Orderings for Graph Collections
Simultaneous Matrix Orderings for Graph Collections
Nathan van Beusekom, Wouter Meulemans, Bettina Speckmann
The archive published only this paper's code-link row. Authors, date and abstract are from arXiv's metadata (CC0), read from the Kaggle arXiv metadata snapshot of 2026-09-12 where its title matched the archive's; the title is the archive's.
Undirected graphs are frequently used to model networks. The topology of an undirected graph G can be captured by an adjacency matrix; this matrix in turn can be visualized directly to give insight into the graph structure. Which visual patterns appear in such a matrix visualization depends on the ordering of its rows and columns. Formally defining the quality of an ordering and then automatically computing a high-quality ordering are both challenging problems; however, effective heuristics exist and are used in practice. Often, graphs exist as part of a collection of graphs on the same set of vertices. To visualize such graph collections, we need a single ordering that works well for all matrices simultaneously. The current state-of-the-art solves this problem by taking a (weighted) union over all graphs and applying existing heuristics. However, this union leads to a loss of information, specifically in those parts of the graphs which are different. We propose a collection-aware approach to avoid this loss of information and apply it to two popular heuristic methods: leaf order and barycenter. The de-facto standard computational quality metrics for matrix ordering capture only block-diagonal patterns (cliques). Instead, we propose to use Moran's I, a spatial auto-correlation metric, which captures the full range of established patterns. The popular leaf order method heuristically optimizes a similar measure which supports the use of Moran's I in this context. We evaluated our methods for simultaneous orderings on real-world datasets using Moran's I as the quality metric. Our results show that our collection-aware approach matches or improves performance compared to the union approach, depending on the similarity of the graphs in the collection. Specifically, our Moran's I-based collection-aware leaf order implementation consistently outperforms other implementations.
Code
Repository list and official/mentioned flags are the archive's, frozen 2025-07-28. Reachability, where shown, is from one Syntology probe window (2026-09-16 to 2026-09-18); repositories not probed show nothing. GitHub stars are not tracked.
Code Syntology ran Syntology
Not run by Syntology. Nothing on this page verifies that the listed code works.
Results from the paper archive 2025-07-28
No leaderboard rows for this paper in the archive.
Report a problem or propose a change · a person checks every report against the paper or source before anything changes; decisions are listed on /corrections