Papers › Simulation-based inference has its own Dodelson-Schneider effect (but it knows that it does)

Simulation-based inference has its own Dodelson-Schneider effect (but it knows that it does)

3 Dec 2024arXiv:2412.02311links table onlyarchive 2025-07-28

Jed Homer, Oliver Friedrich, Daniel Gruen

The archive published only this paper's code-link row. Authors, date and abstract are from arXiv's metadata (CC0), read from the Kaggle arXiv metadata snapshot of 2026-09-12 where its title matched the archive's; the title is the archive's.

Making inferences about physical properties of the Universe requires knowledge of the data likelihood. A Gaussian distribution is commonly assumed for the uncertainties with a covariance matrix estimated from a set of simulations. The noise in such covariance estimates causes two problems: it distorts the width of the parameter contours, and it adds scatter to the location of those contours which is not captured by the widths themselves. For non-Gaussian likelihoods, an approximation may be derived via Simulation-Based Inference (SBI). It is often implicitly assumed that parameter constraints from SBI analyses, which do not use covariance matrices, are not affected by the same problems as parameter estimation with a covariance matrix estimated from simulations. We investigate whether SBI suffers from effects similar to those of covariance estimation in Gaussian likelihoods. We use Neural Posterior and Likelihood Estimation with continuous and masked autoregressive normalizing flows for density estimation. We fit our approximate posterior models to simulations drawn from a Gaussian linear model, so that the SBI result can be compared to the true posterior. We test linear and neural network based compression, demonstrating that neither methods circumvent the issues of covariance estimation. SBI suffers an inflation of posterior variance that is equal or greater than the analytical result in covariance estimation for Gaussian likelihoods for the same number of simulations. The assumption that SBI requires a smaller number of simulations than covariance estimation for a Gaussian likelihood analysis is inaccurate. The limitations of traditional likelihood analysis with simulation-based covariance remain for SBI with a finite simulation budget. Despite these issues, we show that SBI correctly draws the true posterior contour given enough simulations.

Code

Repository list and official/mentioned flags are the archive's, frozen 2025-07-28. Reachability, where shown, is from one Syntology probe window (2026-09-16 to 2026-09-18); repositories not probed show nothing. GitHub stars are not tracked.

Code Syntology ran Syntology

12 samples harvested; 0 ran; 0 honoured the contract we drafted; 12 have no recorded run. Read from Syntology's graph 2026-09-24; that is when this build read the record, not when the samples ran.

Licence: 0 of the 12 samples are pointer only, meaning Syntology does not serve that copy's text. This page shows no code text for any sample; each one links to its file in the repository.

Harvested from homerjed/sbiax. “Ran” means the sample executed on a synthesized input. It does not mean the output is correct, and nothing here reproduces the paper's results. “Honoured” and “violated” refer to a contract Syntology drafted from the code itself; “our draft was wrong” and “fixture could not drive it” are failures of Syntology's instrument, not of the code.

Each sample ends with its code_sha256, Syntology's identity for that exact code. An agent fetches the stored sample with Syntology's MCP tool get_code(code_sha256="…") (how to connect); click an identity to copy that call.

Repository labels, per sample. official repository: The archive marks this repository official for the paper. named in the paper: The archive records that the paper mentions this repository; it is not marked official. community (archive-listed): In the archive's code links for this paper, not marked official and not recorded as mentioned in the paper. found in paper text by Syntology: Syntology found this repository in the paper's own text; whether it is the authors' implementation is not asserted. community: Not in the archive's code links for this paper; a community repository Syntology harvested. Samples from a repository marked official are listed first. Licence labels name the repository's licence as recorded at harvest. “Pointer only” means Syntology does not serve that copy's text, for one of four reasons: no licence file was found; the licence was not identified; the licence is recorded as permissive but that copy's record is not marked cleared; or the licence is outside the permissive list Syntology serves text under (MIT, Apache-2.0, BSD and similar). Some licences outside that list permit redistribution, such as WTFPL, and GPL-3.0 under its conditions; they are simply not on the list. Hover a licence label for the reason. File links open the file on GitHub at the default branch, which may have changed since the harvest.

Results from the paper archive 2025-07-28

No leaderboard rows for this paper in the archive.

Report a problem or propose a change · a person checks every report against the paper or source before anything changes; decisions are listed on /corrections