Papers › Simple connectome inference from partial correlation statistics in calcium imaging

Simple connectome inference from partial correlation statistics in calcium imaging

30 Jun 2014arXiv:1406.7865archive 2025-07-28

Antonio Sutera, Arnaud Joly, Vincent François-Lavet, Zixiao Aaron Qiu, Gilles Louppe, Damien Ernst, Pierre Geurts

In this work, we propose a simple yet effective solution to the problem of connectome inference in calcium imaging data. The proposed algorithm consists of two steps. First, processing the raw signals to detect neural peak activities. Second, inferring the degree of association between neurons from partial correlation statistics. This paper summarises the methodology that led us to win the Connectomics Challenge, proposes a simplified version of our method, and finally compares our results with respect to other inference methods.

PaperPDFCode

Code

asutera/kaggle-connectomics officialmentioned in papermentioned on GitHub report

Repository list and official/mentioned flags are the archive's, frozen 2025-07-28. Reachability, where shown, is from one Syntology probe window (2026-09-16 to 2026-09-18); repositories not probed show nothing. GitHub stars are not tracked.

Code Syntology ran Syntology

Not run by Syntology. Nothing on this page verifies that the listed code works.

Results from the paper archive 2025-07-28

No leaderboard rows for this paper in the archive.

Report a problem or propose a change · a person checks every report against the paper or source before anything changes; decisions are listed on /corrections