Papers › Sign and Basis Invariant Networks for Spectral Graph Representation Learning

Sign and Basis Invariant Networks for Spectral Graph Representation Learning

25 Feb 2022arXiv:2202.13013archive 2025-07-28

Derek Lim, Joshua Robinson, Lingxiao Zhao, Tess Smidt, Suvrit Sra, Haggai Maron, Stefanie Jegelka

We introduce SignNet and BasisNet -- new neural architectures that are invariant to two key symmetries displayed by eigenvectors: (i) sign flips, since if v is an eigenvector then so is -v; and (ii) more general basis symmetries, which occur in higher dimensional eigenspaces with infinitely many choices of basis eigenvectors. We prove that under certain conditions our networks are universal, i.e., they can approximate any continuous function of eigenvectors with the desired invariances. When used with Laplacian eigenvectors, our networks are provably more expressive than existing spectral methods on graphs; for instance, they subsume all spectral graph convolutions, certain spectral graph invariants, and previously proposed graph positional encodings as special cases. Experiments show that our networks significantly outperform existing baselines on molecular graph regression, learning expressive graph representations, and learning neural fields on triangle meshes. Our code is available at https://github.com/cptq/SignNet-BasisNet .

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cptq/SignNet-BasisNet officialmentioned in papermentioned on GitHubpytorchMIT report
tum-vision/intrinsic-neural-fields mentioned on GitHubpytorch report

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Graph RegressionGraph Representation LearningRepresentation Learning

Results from the paper archive 2025-07-28

TaskDatasetModelMetricValueRank at snapshotLeaderboardReport
Graph Regression ZINC-500k PNA-SignNet MAE 0.084 #16 of 36 Archive leaderboard report
Graph Regression ZINC-full SignNet Test MAE 0.024±0.003 #8 of 19 Archive leaderboard report

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