Papers › SegVol: Universal and Interactive Volumetric Medical Image Segmentation

SegVol: Universal and Interactive Volumetric Medical Image Segmentation

22 Nov 2023arXiv:2311.13385archive 2025-07-28

Yuxin Du, Fan Bai, Tiejun Huang, Bo Zhao

Precise image segmentation provides clinical study with instructive information. Despite the remarkable progress achieved in medical image segmentation, there is still an absence of a 3D foundation segmentation model that can segment a wide range of anatomical categories with easy user interaction. In this paper, we propose a 3D foundation segmentation model, named SegVol, supporting universal and interactive volumetric medical image segmentation. By scaling up training data to 90K unlabeled Computed Tomography (CT) volumes and 6K labeled CT volumes, this foundation model supports the segmentation of over 200 anatomical categories using semantic and spatial prompts. To facilitate efficient and precise inference on volumetric images, we design a zoom-out-zoom-in mechanism. Extensive experiments on 22 anatomical segmentation tasks verify that SegVol outperforms the competitors in 19 tasks, with improvements up to 37.24% compared to the runner-up methods. We demonstrate the effectiveness and importance of specific designs by ablation study. We expect this foundation model can promote the development of volumetric medical image analysis. The model and code are publicly available at: https://github.com/BAAI-DCAI/SegVol.

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BCELoss baai-dcai/segvol/network/model.py official repository ran fingerprinted MIT (permissive) · 36f26d56281c52ef · report
BinaryDiceLoss baai-dcai/segvol/network/model.py official repository ran fingerprinted MIT (permissive) · 89f037803e582646 · report
collate_fn BAAI-DCAI/SegVol/data_utils.py official repository ran MIT (permissive) · f28d43cf11e329dc · report
combine_gt_fh BAAI-DCAI/SegVol/data_process/pseudo_mask_process.py official repository ran MIT (permissive) · 3ce5ee054e5ef306 · report
dice_score BAAI-DCAI/SegVol/inference_demo.py official repository ran fingerprinted MIT (permissive) · 3d04f3558b5dfd24 · report
generate_box baai-dcai/segvol/network/model.py official repository ran · our draft was wrong MIT (permissive) · 22ca9778295d4921 · report
get_rel_pos BAAI-DCAI/SegVol/segment_anything_volumetric/modeling/image_encoder.py official repository ran · fixture could not drive it MIT (permissive) · 733d7f0bedcb74c2 · report
normalize BAAI-DCAI/SegVol/data_process/train_data_process.py official repository ran fingerprinted MIT (permissive) · 472c84cf48b2a3a1 · report
select_points baai-dcai/segvol/network/model.py official repository ran · our draft was wrong MIT (permissive) · ca023fe736b612b2 · report
window_partition BAAI-DCAI/SegVol/segment_anything_volumetric/modeling/image_encoder.py official repository ran · fixture could not drive it fingerprinted MIT (permissive) · 105fa08885dc36cc · report
SegVol baai-dcai/segvol/network/model.py official repository unverified MIT (permissive) · 144a0c9e8f82ddf9 · report
TextEncoder baai-dcai/segvol/network/model.py official repository unverified MIT (permissive) · 7f2202c6eb9e6be5 · report
build_concat_dataset BAAI-DCAI/SegVol/data_utils.py official repository unverified MIT (permissive) · 9ffc89cec399a67d · report
build_sam_vit_3d BAAI-DCAI/SegVol/segment_anything_volumetric/build_sam.py official repository unverified MIT (permissive) · 0421924382775c16 · report
get_loader BAAI-DCAI/SegVol/data_utils.py official repository unverified MIT (permissive) · 883ac6b675c5850b · report
process_ct_gt BAAI-DCAI/SegVol/data_process/demo_data_process.py official repository unverified MIT (permissive) · 18dff7ff75958f6b · report
window_unpartition BAAI-DCAI/SegVol/segment_anything_volumetric/modeling/image_encoder.py official repository unverified MIT (permissive) · 27be441cc8213e52 · report

Tasks

Computed Tomography (CT)Image SegmentationMedical Image AnalysisMedical Image SegmentationSegmentationSemantic SegmentationVolumetric Medical Image Segmentation

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