Papers › Scalable Graph Networks for Particle Simulations

Scalable Graph Networks for Particle Simulations

14 Oct 2020arXiv:2010.06948archive 2025-07-28

Karolis Martinkus, Aurelien Lucchi, Nathanaël Perraudin

Learning system dynamics directly from observations is a promising direction in machine learning due to its potential to significantly enhance our ability to understand physical systems. However, the dynamics of many real-world systems are challenging to learn due to the presence of nonlinear potentials and a number of interactions that scales quadratically with the number of particles N, as in the case of the N-body problem. In this work, we introduce an approach that transforms a fully-connected interaction graph into a hierarchical one which reduces the number of edges to O(N). This results in linear time and space complexity while the pre-computation of the hierarchical graph requires O(Nlog(N)) time and O(N) space. Using our approach, we are able to train models on much larger particle counts, even on a single GPU. We evaluate how the phase space position accuracy and energy conservation depend on the number of simulated particles. Our approach retains high accuracy and efficiency even on large-scale gravitational N-body simulations which are impossible to run on a single machine if a fully-connected graph is used. Similar results are also observed when simulating Coulomb interactions. Furthermore, we make several important observations regarding the performance of this new hierarchical model, including: i) its accuracy tends to improve with the number of particles in the simulation and ii) its generalisation to unseen particle counts is also much better than for models that use all O(N²) interactions.

PaperPDFCodeCode Syntology ran

In Syntology Open this paper in Syntology's Atlas, the map of the papers in Syntology's graph and their citations.

For agents, Syntology's MCP tool lists every function and class Syntology harvested from this paper and whether it ran (how to connect): get_harvested_code_for_paper(arxiv_id="2010.06948")

Code

Syntology Ran 0 of 10 code samples harvested from 1 repository linked to this paper; 10 have no recorded run.

By repository: official repository: 10 samples from 1 repository, 0 ran. The run record, sample by sample. “Ran” means executed on a synthesized input, not that the code is correct or reproduces the paper.

KarolisMart/scalable-gnns officialmentioned on GitHubpytorchMIT report

Repository list and official/mentioned flags are the archive's, frozen 2025-07-28. Reachability, where shown, is from one Syntology probe window (2026-09-16 to 2026-09-18); repositories not probed show nothing. GitHub stars are not tracked.

Code Syntology ran Syntology

10 samples harvested; 0 ran; 0 honoured the contract we drafted; 10 have no recorded run. Read from Syntology's graph 2026-09-24; that is when this build read the record, not when the samples ran.

10unverified

Licence: 0 of the 10 samples are pointer only, meaning Syntology does not serve that copy's text. This page shows no code text for any sample; each one links to its file in the repository.

Harvested from KarolisMart/scalable-gnns. “Ran” means the sample executed on a synthesized input. It does not mean the output is correct, and nothing here reproduces the paper's results. “Honoured” and “violated” refer to a contract Syntology drafted from the code itself; “our draft was wrong” and “fixture could not drive it” are failures of Syntology's instrument, not of the code.

Each sample ends with its code_sha256, Syntology's identity for that exact code. An agent fetches the stored sample with Syntology's MCP tool get_code(code_sha256="…") (how to connect); click an identity to copy that call.

Repository labels, per sample. official repository: The archive marks this repository official for the paper. named in the paper: The archive records that the paper mentions this repository; it is not marked official. community (archive-listed): In the archive's code links for this paper, not marked official and not recorded as mentioned in the paper. found in paper text by Syntology: Syntology found this repository in the paper's own text; whether it is the authors' implementation is not asserted. community: Not in the archive's code links for this paper; a community repository Syntology harvested. Samples from a repository marked official are listed first. Licence labels name the repository's licence as recorded at harvest. “Pointer only” means Syntology does not serve that copy's text, for one of four reasons: no licence file was found; the licence was not identified; the licence is recorded as permissive but that copy's record is not marked cleared; or the licence is outside the permissive list Syntology serves text under (MIT, Apache-2.0, BSD and similar). Some licences outside that list permit redistribution, such as WTFPL, and GPL-3.0 under its conditions; they are simply not on the list. Hover a licence label for the reason. File links open the file on GitHub at the default branch, which may have changed since the harvest.

PBC_MSE_loss KarolisMart/scalable-gnns/model.py official repository unverified MIT (permissive) · 059b530cfe806199 · report
apply_PBC_to_coordinates KarolisMart/scalable-gnns/model.py official repository unverified MIT (permissive) · 3eb6bbe77764dd78 · report
apply_PBC_to_distances KarolisMart/scalable-gnns/model.py official repository unverified MIT (permissive) · b9295de858190369 · report
full_graph_senders_and_recievers KarolisMart/scalable-gnns/util.py official repository unverified MIT (permissive) · 7eed0440e91c5014 · report
get_accelerations KarolisMart/scalable-gnns/data.py official repository unverified MIT (permissive) · 039305975f9656d3 · report
get_accelerations_gpu KarolisMart/scalable-gnns/data.py official repository unverified MIT (permissive) · d3965bce2c32e0c5 · report
get_cells KarolisMart/scalable-gnns/util.py official repository unverified MIT (permissive) · eaa7fe288a06cc49 · report
leapfrog KarolisMart/scalable-gnns/data.py official repository unverified MIT (permissive) · d76fb96738dbf8eb · report
nn_graph_senders_and_recievers KarolisMart/scalable-gnns/util.py official repository unverified MIT (permissive) · c09cf84f33befece · report
plot_trajectory KarolisMart/scalable-gnns/visualize.py official repository unverified MIT (permissive) · 5b3b050adfb1a17b · report

Results from the paper archive 2025-07-28

No leaderboard rows for this paper in the archive.

Report a problem or propose a change · a person checks every report against the paper or source before anything changes; decisions are listed on /corrections