Papers › Real-time 3D analysis during electron tomography using tomviz

Real-time 3D analysis during electron tomography using tomviz

3 Aug 2022arXiv:2208.01850links table onlyarchive 2025-07-28

Jonathan Schwartz, Chris Harris, Jacob Pietryga, Huihuo Zheng Prashant Kumar, Anastasia Visheratina, Nicholas Kotor, Brianna Major, Patrick Avery, Peter Ercius, Utmarsch Ayachit, Berk Geveci, David Muller, Alessandro Genova, Yi Jiang, Marcus Hanwell, Robert Hovden

The archive published only this paper's code-link row. Authors, date and abstract are from arXiv's metadata (CC0), read from the Kaggle arXiv metadata snapshot of 2026-09-12 where its title matched the archive's; the title is the archive's.

The demand for high-throughput electron tomography is rapidly increasing in biological and material sciences. However, this 3D imaging technique is computationally bottlenecked by alignment and reconstruction which runs from hours to days. We demonstrate real-time tomography with dynamic 3D tomographic visualization to enable rapid interpretation of specimen structure immediately as data is collected on an electron microscope. Using geometrically complex chiral nanoparticles, we show volumetric interpretation can begin in less than 10 minutes and a high quality tomogram is available within 30 minutes. Real time tomography is integrated into tomviz, an open source and cross platform 3D analysis tool that contains intuitive graphical user interfaces (GUI) to enable any scientist to characterize biological and material structure in 3D.

PaperPDFCode

Code

OpenChemistry/tomviz officialmentioned in paper report

Repository list and official/mentioned flags are the archive's, frozen 2025-07-28. Reachability, where shown, is from one Syntology probe window (2026-09-16 to 2026-09-18); repositories not probed show nothing. GitHub stars are not tracked.

Code Syntology ran Syntology

Not run by Syntology. Nothing on this page verifies that the listed code works.

Results from the paper archive 2025-07-28

No leaderboard rows for this paper in the archive.

Report a problem or propose a change · a person checks every report against the paper or source before anything changes; decisions are listed on /corrections