Papers › Perfect Alignment May be Poisonous to Graph Contrastive Learning

Perfect Alignment May be Poisonous to Graph Contrastive Learning

6 Oct 2023arXiv:2310.03977archive 2025-07-28

Jingyu Liu, Huayi Tang, Yong liu

Graph Contrastive Learning (GCL) aims to learn node representations by aligning positive pairs and separating negative ones. However, few of researchers have focused on the inner law behind specific augmentations used in graph-based learning. What kind of augmentation will help downstream performance, how does contrastive learning actually influence downstream tasks, and why the magnitude of augmentation matters so much? This paper seeks to address these questions by establishing a connection between augmentation and downstream performance. Our findings reveal that GCL contributes to downstream tasks mainly by separating different classes rather than gathering nodes of the same class. So perfect alignment and augmentation overlap which draw all intra-class samples the same can not fully explain the success of contrastive learning. Therefore, in order to understand how augmentation aids the contrastive learning process, we conduct further investigations into the generalization, finding that perfect alignment that draw positive pair the same could help contrastive loss but is poisonous to generalization, as a result, perfect alignment may not lead to best downstream performance, so specifically designed augmentation is needed to achieve appropriate alignment performance and improve downstream accuracy. We further analyse the result by information theory and graph spectrum theory and propose two simple but effective methods to verify the theories. The two methods could be easily applied to various GCL algorithms and extensive experiments are conducted to prove its effectiveness. The code is available at https://github.com/somebodyhh1/GRACEIS

PaperPDFCodeCode Syntology ran

In Syntology Open this paper in Syntology's Atlas, the map of the papers in Syntology's graph and their citations.

For agents, Syntology's MCP tool lists every function and class Syntology harvested from this paper and whether it ran (how to connect): get_harvested_code_for_paper(arxiv_id="2310.03977")

Code

Syntology Ran 5 of 5 code samples harvested from 1 repository linked to this paper; 0 have no recorded run. Of those that ran: 1 ran · our draft was wrong; 4 ran with no contract checked.

By repository: official repository: 5 samples from 1 repository, 5 ran. The run record, sample by sample. “Ran” means executed on a synthesized input, not that the code is correct or reproduces the paper.

somebodyhh1/graceis officialmentioned in paperpytorch report

Repository list and official/mentioned flags are the archive's, frozen 2025-07-28. Reachability, where shown, is from one Syntology probe window (2026-09-16 to 2026-09-18); repositories not probed show nothing. GitHub stars are not tracked.

Code Syntology ran Syntology

5 samples harvested; 5 ran; 0 honoured the contract we drafted; 0 have no recorded run. Read from Syntology's graph 2026-09-24; that is when this build read the record, not when the samples ran.

1ran · our draft was wrong
4ran

Licence: 5 of the 5 samples are pointer only, meaning Syntology does not serve that copy's text. This page shows no code text for any sample; each one links to its file in the repository.

Harvested from somebodyhh1/GRACEIS. “Ran” means the sample executed on a synthesized input. It does not mean the output is correct, and nothing here reproduces the paper's results. “Honoured” and “violated” refer to a contract Syntology drafted from the code itself; “our draft was wrong” and “fixture could not drive it” are failures of Syntology's instrument, not of the code.

Each sample ends with its code_sha256, Syntology's identity for that exact code. An agent fetches the stored sample with Syntology's MCP tool get_code(code_sha256="…") (how to connect); click an identity to copy that call.

Repository labels, per sample. official repository: The archive marks this repository official for the paper. named in the paper: The archive records that the paper mentions this repository; it is not marked official. community (archive-listed): In the archive's code links for this paper, not marked official and not recorded as mentioned in the paper. found in paper text by Syntology: Syntology found this repository in the paper's own text; whether it is the authors' implementation is not asserted. community: Not in the archive's code links for this paper; a community repository Syntology harvested. Samples from a repository marked official are listed first. Licence labels name the repository's licence as recorded at harvest. “Pointer only” means Syntology does not serve that copy's text, for one of four reasons: no licence file was found; the licence was not identified; the licence is recorded as permissive but that copy's record is not marked cleared; or the licence is outside the permissive list Syntology serves text under (MIT, Apache-2.0, BSD and similar). Some licences outside that list permit redistribution, such as WTFPL, and GPL-3.0 under its conditions; they are simply not on the list. Hover a licence label for the reason. File links open the file on GitHub at the default branch, which may have changed since the harvest.

compute_cam somebodyhh1/GRACEIS/mask.py official repository ran no licence file found · pointer only · a9ad6a42fc6393d7 · report
drop_edge somebodyhh1/GRACEIS/mask.py official repository ran no licence file found · pointer only · ec135d55c3e0e7d2 · report
drop_feature somebodyhh1/GRACEIS/model.py official repository ran · our draft was wrong fingerprinted no licence file found · pointer only · 22bfb6129463d322 · report
get_path somebodyhh1/GRACEIS/dataset.py official repository ran fingerprinted no licence file found · pointer only · 5b18ad957d4c29e1 · report
normalize somebodyhh1/GRACEIS/mask.py official repository ran fingerprinted no licence file found · pointer only · 1b4a3fc2148ab0e2 · report

Tasks

Contrastive Learning

Results from the paper archive 2025-07-28

No leaderboard rows for this paper in the archive.

Methods

Contrastive Learning

Report a problem or propose a change · a person checks every report against the paper or source before anything changes; decisions are listed on /corrections