Papers › PatchWorkPlot: simultaneous visualization of local alignments across multiple sequences

PatchWorkPlot: simultaneous visualization of local alignments across multiple sequences

25 Mar 2025arXiv:2503.20766archive 2025-07-28

Mariia Pospelova, Yana Safonova

Motivation: Revealing structural variations across sequences of closely related individuals or species is crucial for understanding their diversification mechanisms and roles. Results: We developed PatchWorkPlot, a tool for visualization of pairwise alignments of multiple annotated sequences as dot plots combined into a single matrix. Availability and implementation: PatchWorkPlot is implemented using Python 3 and is publicly available at GitHub: github.com/yana-safonova/PatchWorkPlot.

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