Papers › Towards Resource-Efficient Streaming of Large-Scale Medical Image Datasets for Deep Learning

Towards Resource-Efficient Streaming of Large-Scale Medical Image Datasets for Deep Learning

1 Jul 2023arXiv:2307.00438archive 2025-07-28

Pranav Kulkarni, Adway Kanhere, Eliot Siegel, Paul H. Yi, Vishwa S. Parekh

Large-scale medical imaging datasets have accelerated deep learning (DL) for medical image analysis. However, the large scale of these datasets poses a challenge for researchers, resulting in increased storage and bandwidth requirements for hosting and accessing them. Since different researchers have different use cases and require different resolutions or formats for DL, it is neither feasible to anticipate every researcher's needs nor practical to store data in multiple resolutions and formats. To that end, we propose the Medical Image Streaming Toolkit (MIST), a format-agnostic database that enables streaming of medical images at different resolutions and formats from a single high-resolution copy. We evaluated MIST across eight popular, large-scale medical imaging datasets spanning different body parts, modalities, and formats. Our results showed that our framework reduced the storage and bandwidth requirements for hosting and downloading datasets without impacting image quality. We demonstrate that MIST addresses the challenges posed by large-scale medical imaging datasets by building a data-efficient and format-agnostic database to meet the diverse needs of researchers and reduce barriers to DL research in medical imaging.

PaperPDFCode

Code

BioIntelligence-Lab/openjphpy officialmentioned in papermentioned on GitHub report
biointelligence-lab/mist officialmentioned in papermentioned on GitHub report
um2ii/mist officialmentioned in papermentioned on GitHub report
um2ii/mist_paper officialmentioned in papermentioned on GitHub report
um2ii/openjphpy officialmentioned in papermentioned on GitHub report

Repository list and official/mentioned flags are the archive's, frozen 2025-07-28. Reachability, where shown, is from one Syntology probe window (2026-09-16 to 2026-09-18); repositories not probed show nothing. GitHub stars are not tracked.

Code Syntology ran Syntology

Not run by Syntology. Nothing on this page verifies that the listed code works.

Tasks

Medical Image Analysis

Results from the paper archive 2025-07-28

No leaderboard rows for this paper in the archive.

Report a problem or propose a change · a person checks every report against the paper or source before anything changes; decisions are listed on /corrections