Papers › On the Surprising Behaviour of node2vec

On the Surprising Behaviour of node2vec

16 Jun 2022arXiv:2206.08252archive 2025-07-28

Celia Hacker, Bastian Rieck

Graph embedding techniques are a staple of modern graph learning research. When using embeddings for downstream tasks such as classification, information about their stability and robustness, i.e., their susceptibility to sources of noise, stochastic effects, or specific parameter choices, becomes increasingly important. As one of the most prominent graph embedding schemes, we focus on node2vec and analyse its embedding quality from multiple perspectives. Our findings indicate that embedding quality is unstable with respect to parameter choices, and we propose strategies to remedy this in practice.

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aidos-lab/node2vec-surprises officialmentioned in paperpytorchBSD-3-Clause report

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bound_chung aidos-lab/node2vec-surprises/node2vec_surprises/random_walks.py official repository unverified BSD-3-Clause (permissive) · b35689c5f74d6cf5 · report
diameter aidos-lab/node2vec-surprises/node2vec_surprises/metrics.py official repository unverified BSD-3-Clause (permissive) · 41345cf02332455b · report
dist_parameters aidos-lab/node2vec-surprises/node2vec_surprises/analyse_results.py official repository unverified BSD-3-Clause (permissive) · 14ae9a0d1f329f9e · report
hausdorff_distance aidos-lab/node2vec-surprises/node2vec_surprises/metrics.py official repository unverified BSD-3-Clause (permissive) · efe305b053380a9e · report
link_distributions_emd aidos-lab/node2vec-surprises/node2vec_surprises/metrics.py official repository unverified BSD-3-Clause (permissive) · db2a153e859d09d0 · report
make_labels aidos-lab/node2vec-surprises/node2vec_surprises/analyse_results.py official repository unverified BSD-3-Clause (permissive) · e676ebfb3b892929 · report
print_spectrum aidos-lab/node2vec-surprises/node2vec_surprises/graphs.py official repository unverified BSD-3-Clause (permissive) · 224eb2f81100db05 · report
sbm aidos-lab/node2vec-surprises/node2vec_surprises/node2vec.py official repository unverified BSD-3-Clause (permissive) · 548a9bb96674eba5 · report
stationary_distribution aidos-lab/node2vec-surprises/node2vec_surprises/random_walks.py official repository unverified BSD-3-Clause (permissive) · df16bfaa95c60d5e · report
transition_matrix aidos-lab/node2vec-surprises/node2vec_surprises/random_walks.py official repository unverified BSD-3-Clause (permissive) · 0de48aa32f33db8b · report

Tasks

Graph EmbeddingGraph Learning

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Methods

node2vec

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