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Mining experimental data from Materials Science literature with Large Language Models: an evaluation study

19 Jan 2024arXiv:2401.11052archive 2025-07-28

Luca Foppiano, Guillaume Lambard, Toshiyuki Amagasa, Masashi Ishii

This study is dedicated to assessing the capabilities of large language models (LLMs) such as GPT-3.5-Turbo, GPT-4, and GPT-4-Turbo in extracting structured information from scientific documents in materials science. To this end, we primarily focus on two critical tasks of information extraction: (i) a named entity recognition (NER) of studied materials and physical properties and (ii) a relation extraction (RE) between these entities. Due to the evident lack of datasets within Materials Informatics (MI), we evaluated using SuperMat, based on superconductor research, and MeasEval, a generic measurement evaluation corpus. The performance of LLMs in executing these tasks is benchmarked against traditional models based on the BERT architecture and rule-based approaches (baseline). We introduce a novel methodology for the comparative analysis of intricate material expressions, emphasising the standardisation of chemical formulas to tackle the complexities inherent in materials science information assessment. For NER, LLMs fail to outperform the baseline with zero-shot prompting and exhibit only limited improvement with few-shot prompting. However, a GPT-3.5-Turbo fine-tuned with the appropriate strategy for RE outperforms all models, including the baseline. Without any fine-tuning, GPT-4 and GPT-4-Turbo display remarkable reasoning and relationship extraction capabilities after being provided with merely a couple of examples, surpassing the baseline. Overall, the results suggest that although LLMs demonstrate relevant reasoning skills in connecting concepts, specialised models are currently a better choice for tasks requiring extracting complex domain-specific entities like materials. These insights provide initial guidance applicable to other materials science sub-domains in future work.

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Tasks

NERNamed Entity RecognitionNamed Entity Recognition (NER)Relation Extractionnamed-entity-recognition

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Absolute Position EncodingsAdamAttentionAttention DropoutBERTBPECosine AnnealingDense ConnectionsDropoutFocusGPT-3GPT-4Label SmoothingLayer NormalizationLinear LayerLinear Warmup With Cosine AnnealingLinear Warmup With Linear DecayMulti-Head AttentionPosition-Wise Feed-Forward LayerResidual ConnectionSoftmaxTransformerWeight DecayWordPiece

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