Papers › Heterogeneous networks in drug-target interaction prediction

Heterogeneous networks in drug-target interaction prediction

22 Apr 2025arXiv:2504.16152archive 2025-07-28

Mohammad Molaee, Nasrollah Moghadam Charkari, Foad Ghaderi

Drug discovery requires a tremendous amount of time and cost. Computational drug-target interaction prediction, a significant part of this process, can reduce these requirements by narrowing the search space for wet lab experiments. In this survey, we provide comprehensive details of graph machine learning-based methods in predicting drug-target interaction, as they have shown promising results in this field. These details include the overall framework, main contribution, datasets, and their source codes. The selected papers were mainly published from 2020 to 2024. Prior to discussing papers, we briefly introduce the datasets commonly used with these methods and measurements to assess their performance. Finally, future challenges and some crucial areas that need to be explored are discussed.

PaperPDFCode

Code

ahu-bioinf-lab/amgdti officialmentioned in paperpytorch report
ljatynu/imchgan officialmentioned in paper report
luoyunan/DTINet officialmentioned in paper report
macrohongz/hampdti officialmentioned in paperpytorch report
medicinebiology-ai/eeg-dti officialmentioned in papertf report
wyx2012/bg-dti officialmentioned in paperpytorch report

Repository list and official/mentioned flags are the archive's, frozen 2025-07-28. Reachability, where shown, is from one Syntology probe window (2026-09-16 to 2026-09-18); repositories not probed show nothing. GitHub stars are not tracked.

Code Syntology ran Syntology

Not run by Syntology. Nothing on this page verifies that the listed code works.

Tasks

Drug DiscoveryPrediction

Results from the paper archive 2025-07-28

No leaderboard rows for this paper in the archive.

Report a problem or propose a change · a person checks every report against the paper or source before anything changes; decisions are listed on /corrections