Papers › EMIT- Event-Based Masked Auto Encoding for Irregular Time Series

EMIT- Event-Based Masked Auto Encoding for Irregular Time Series

25 Sep 2024arXiv:2409.16554archive 2025-07-28

Hrishikesh Patel, Ruihong Qiu, Adam Irwin, Shazia Sadiq, Sen Wang

Irregular time series, where data points are recorded at uneven intervals, are prevalent in healthcare settings, such as emergency wards where vital signs and laboratory results are captured at varying times. This variability, which reflects critical fluctuations in patient health, is essential for informed clinical decision-making. Existing self-supervised learning research on irregular time series often relies on generic pretext tasks like forecasting, which may not fully utilise the signal provided by irregular time series. There is a significant need for specialised pretext tasks designed for the characteristics of irregular time series to enhance model performance and robustness, especially in scenarios with limited data availability. This paper proposes a novel pretraining framework, EMIT, an event-based masking for irregular time series. EMIT focuses on masking-based reconstruction in the latent space, selecting masking points based on the rate of change in the data. This method preserves the natural variability and timing of measurements while enhancing the model's ability to process irregular intervals without losing essential information. Extensive experiments on the MIMIC-III and PhysioNet Challenge datasets demonstrate the superior performance of our event-based masking strategy. The code has been released at https://github.com/hrishi-ds/EMIT.

Code

Repository list and official/mentioned flags are the archive's, frozen 2025-07-28. Reachability, where shown, is from one Syntology probe window (2026-09-16 to 2026-09-18); repositories not probed show nothing. GitHub stars are not tracked.

Code Syntology ran Syntology

15 samples harvested; 14 ran; 0 honoured the contract we drafted; 1 has no recorded run. Read from Syntology's graph 2026-09-24; that is when this build read the record, not when the samples ran.

Licence: 0 of the 15 samples are pointer only, meaning Syntology does not serve that copy's text. This page shows no code text for any sample; each one links to its file in the repository.

Harvested from hrishi-ds/EMIT. “Ran” means the sample executed on a synthesized input. It does not mean the output is correct, and nothing here reproduces the paper's results. “Honoured” and “violated” refer to a contract Syntology drafted from the code itself; “our draft was wrong” and “fixture could not drive it” are failures of Syntology's instrument, not of the code.

Each sample ends with its code_sha256, Syntology's identity for that exact code. An agent fetches the stored sample with Syntology's MCP tool get_code(code_sha256="…") (how to connect); click an identity to copy that call.

Repository labels, per sample. official repository: The archive marks this repository official for the paper. named in the paper: The archive records that the paper mentions this repository; it is not marked official. community (archive-listed): In the archive's code links for this paper, not marked official and not recorded as mentioned in the paper. found in paper text by Syntology: Syntology found this repository in the paper's own text; whether it is the authors' implementation is not asserted. community: Not in the archive's code links for this paper; a community repository Syntology harvested. Samples from a repository marked official are listed first. Licence labels name the repository's licence as recorded at harvest. “Pointer only” means Syntology does not serve that copy's text, for one of four reasons: no licence file was found; the licence was not identified; the licence is recorded as permissive but that copy's record is not marked cleared; or the licence is outside the permissive list Syntology serves text under (MIT, Apache-2.0, BSD and similar). Some licences outside that list permit redistribution, such as WTFPL, and GPL-3.0 under its conditions; they are simply not on the list. Hover a licence label for the reason. File links open the file on GitHub at the default branch, which may have changed since the harvest.

Tasks

Results from the paper archive 2025-07-28

No leaderboard rows for this paper in the archive.

Report a problem or propose a change · a person checks every report against the paper or source before anything changes; decisions are listed on /corrections