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eipy: An Open-Source Python Package for Multi-modal Data Integration using Heterogeneous Ensembles

17 Jan 2024arXiv:2401.09582archive 2025-07-28

Jamie J. R. Bennett, Aviad Susman, Yan Chak Li, Gaurav Pandey

In this paper, we introduce eipy--an open-source Python package for developing effective, multi-modal heterogeneous ensembles for classification. eipy simultaneously provides both a rigorous, and user-friendly framework for comparing and selecting the best-performing multi-modal data integration and predictive modeling methods by systematically evaluating their performance using nested cross-validation. The package is designed to leverage scikit-learn-like estimators as components to build multi-modal predictive models. An up-to-date user guide, including API reference and tutorials, for eipy is maintained at https://eipy.readthedocs.io . The main repository for this project can be found on GitHub at https://github.com/GauravPandeyLab/eipy .

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