Papers › Bayesian Inference Gaussian Process Multiproxy Alignment of Continuous Signals...

Bayesian Inference Gaussian Process Multiproxy Alignment of Continuous Signals (BIGMACS): Applications for Paleoceanography

20 Jul 2019arXiv:1907.08738archive 2025-07-28

Tae-Hee Lee, Lorraine E. Lisiecki, Devin Rand, Geoffrey Gebbie, Charles E. Lawrence

We first introduce a novel profile-based alignment algorithm, the multiple continuous Signal Alignment algorithm with Gaussian Process Regression profiles (SA-GPR). SA-GPR addresses the limitations of currently available signal alignment methods by adopting a hybrid of the particle smoothing and Markov-chain Monte Carlo (MCMC) algorithms to align signals, and by applying the Gaussian process regression to construct profiles to be aligned continuously. SA-GPR shares all the strengths of the existing alignment algorithms that depend on profiles but is more exact in the sense that profiles do not need to be discretized as sequential bins. The uncertainty of performance over the resolution of such bins is thereby eliminated. This methodology produces alignments that are consistent, that regularize extreme cases, and that properly reflect the inherent uncertainty. Then we extend SA-GPR to a specific problem in the field of paleoceanography with a method called Bayesian Inference Gaussian Process Multiproxy Alignment of Continuous Signals (BIGMACS). The goal of BIGMACS is to infer continuous ages for ocean sediment cores using two classes of age proxies: proxies that explicitly return calendar ages (e.g., radiocarbon) and those used to synchronize ages in multiple marine records (e.g., an oxygen isotope based marine proxy known as benthic δ¹⁸O). BIGMACS integrates these two proxies by iteratively performing two steps: profile construction from benthic δ¹⁸O age models and alignment of each core to the profile also reflecting radiocarbon dates. We use BIGMACS to construct a new Deep Northeastern Atlantic stack (i.e., a profile from a particular benthic δ¹⁸O records) of five ocean sediment cores. We conclude by constructing multiproxy age models for two additional cores from the same region by aligning them to the stack.

PaperPDFCode

Code

eilion/SA-GPR officialmentioned in papermentioned on GitHub report

Repository list and official/mentioned flags are the archive's, frozen 2025-07-28. Reachability, where shown, is from one Syntology probe window (2026-09-16 to 2026-09-18); repositories not probed show nothing. GitHub stars are not tracked.

Code Syntology ran Syntology

Not run by Syntology. Nothing on this page verifies that the listed code works.

Tasks

Bayesian InferenceGPRregression

Results from the paper archive 2025-07-28

No leaderboard rows for this paper in the archive.

Methods

Gaussian Process

Report a problem or propose a change · a person checks every report against the paper or source before anything changes; decisions are listed on /corrections