Papers › ChEX: Interactive Localization and Region Description in Chest X-rays

ChEX: Interactive Localization and Region Description in Chest X-rays

24 Apr 2024arXiv:2404.15770archive 2025-07-28

Philip Müller, Georgios Kaissis, Daniel Rueckert

Report generation models offer fine-grained textual interpretations of medical images like chest X-rays, yet they often lack interactivity (i.e. the ability to steer the generation process through user queries) and localized interpretability (i.e. visually grounding their predictions), which we deem essential for future adoption in clinical practice. While there have been efforts to tackle these issues, they are either limited in their interactivity by not supporting textual queries or fail to also offer localized interpretability. Therefore, we propose a novel multitask architecture and training paradigm integrating textual prompts and bounding boxes for diverse aspects like anatomical regions and pathologies. We call this approach the Chest X-Ray Explainer (ChEX). Evaluations across a heterogeneous set of 9 chest X-ray tasks, including localized image interpretation and report generation, showcase its competitiveness with SOTA models while additional analysis demonstrates ChEX's interactive capabilities. Code: https://github.com/philip-mueller/chex

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basic_clean philip-mueller/chex/src/chexzero/simple_tokenizer.py official repository ran · our draft was wrong fingerprinted MIT (permissive) · 98f385d847636a3e · report
build_transform_train philip-mueller/chex/src/dataset/image_transform.py official repository ran MIT (permissive) · c92418ae28276871 · report
build_transform_val philip-mueller/chex/src/dataset/image_transform.py official repository ran MIT (permissive) · b2285e1adec31bfd · report
get_pairs philip-mueller/chex/src/chexzero/simple_tokenizer.py official repository ran · our draft was wrong MIT (permissive) · d919ae32e5e4e616 · report
load_class_box_sentences philip-mueller/chex/src/dataset/datasets.py official repository ran MIT (permissive) · 3f0af30481defaad · report
load_from_memmap philip-mueller/chex/src/dataset/dataset_utils.py official repository ran MIT (permissive) · 453f8b864635dfb6 · report
load_sentences philip-mueller/chex/src/dataset/datasets.py official repository ran MIT (permissive) · fe1328b0d1898e0b · report
prepare_ms_cxr philip-mueller/chex/src/dataset/mimic_cxr_datasets.py official repository ran MIT (permissive) · a862f009baeaaaf1 · report
prepend_path philip-mueller/chex/src/dataset/nih_cxr.py official repository ran fingerprinted MIT (permissive) · b55990c8b09c17d0 · report
whitespace_clean philip-mueller/chex/src/chexzero/simple_tokenizer.py official repository ran · our draft was wrong fingerprinted MIT (permissive) · 9542161e9640b858 · report
build_model philip-mueller/chex/src/chexzero/model.py official repository unverified MIT (permissive) · ccfcbefe529dfd77 · report
build_transform philip-mueller/chex/src/dataset/image_transform.py official repository unverified MIT (permissive) · aaa12717b8238a1f · report

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