Papers › An Open-source Toolbox for Analysing and Processing PhysioNet Databases in MATLAB and Octave

An Open-source Toolbox for Analysing and Processing PhysioNet Databases in MATLAB and Octave

24 Sep 2014Journal of Open Research Software 2014 9archive 2025-07-28

Ikaro Silva, George Moody

The WaveForm DataBase (WFDB) Toolbox for MATLAB/Octave enables integrated access to PhysioNet's software and databases. Using the WFDB Toolbox for MATLAB/Octave, users have access to over 50 physiological databases in PhysioNet. The toolbox provides access over 4 TB of biomedical signals including ECG, EEG, EMG, and PLETH. Additionally, most signals are accompanied by metadata such as medical annotations of clinical events: arrhythmias, sleep stages, seizures, hypotensive episodes, etc. Users of this toolbox should easily be able to reproduce, validate, and compare results published based on PhysioNet's software and databases.

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Tasks

Arrhythmia DetectionEEGElectrocardiography (ECG)Electroencephalogram (EEG)Seizure DetectionSleep Stage Detection

Results from the paper archive 2025-07-28

TaskDatasetModelMetricValueRank at snapshotLeaderboardReport
Arrhythmia Detection The PhysioNet Computing in Cardiology Challenge 2017 Feature-based approach (no segmentation) Accuracy (TEST-DB) 79% #1 of 5 Archive leaderboard report
Arrhythmia Detection The PhysioNet Computing in Cardiology Challenge 2017 Feature-based approach (no segmentation) Accuracy (TRAIN-DB) 72.0% #1 of 5 Archive leaderboard report
Arrhythmia Detection The PhysioNet Computing in Cardiology Challenge 2017 Feature-based approach (10 s segments) Accuracy (TEST-DB) 78% #3 of 5 Archive leaderboard report
Arrhythmia Detection The PhysioNet Computing in Cardiology Challenge 2017 Feature-based approach (10 s segments) Accuracy (TRAIN-DB) 76.6% #3 of 5 Archive leaderboard report

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