Papers › An attempt at beating the 3D U-Net

An attempt at beating the 3D U-Net

6 Aug 2019arXiv:1908.02182archive 2025-07-28

Fabian Isensee, Klaus H. Maier-Hein

The U-Net is arguably the most successful segmentation architecture in the medical domain. Here we apply a 3D U-Net to the 2019 Kidney and Kidney Tumor Segmentation Challenge and attempt to improve upon it by augmenting it with residual and pre-activation residual blocks. Cross-validation results on the training cases suggest only very minor, barely measurable improvements. Due to marginally higher dice scores, the residual 3D U-Net is chosen for test set prediction. With a Composite Dice score of 91.23 on the test set, our method outperformed all 105 competing teams and won the KiTS2019 challenge by a small margin.

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MIC-DKFZ/nnunet mentioned in paperpytorchApache-2.0 report

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SegmentationTumor Segmentation

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Concatenated Skip ConnectionConvolutionMax PoolingReLUU-Net

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