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MIMIC-IV ICD-9

Introduced by Joakim Edin et al. in Automated Medical Coding on MIMIC-III and MIMIC-IV: A Critical Review and Replicability Study21 Apr 2023 archive 2025-07-28

MIMIC-IV ICD-9 contains 209,326 discharge summaries—free-text medical documents—annotated with ICD-9 diagnosis and procedure codes. It contains data for patients admitted to the Beth Israel Deaconess Medical Center emergency department or ICU between 2008-2019. All codes with fewer than ten examples have been removed, and the train-val-test split was created using multi-label stratified sampling. The dataset is described further in Automated Medical Coding on MIMIC-III and MIMIC-IV: A Critical Review and Replicability Study, and the code to use the dataset is found here.

The dataset is intended for medical code prediction and was created using MIMIC-IV v2.2 and MIMIC-IV-NOTE v2.2. Using the two datasets requires a license obtained in Physionet; this can take a couple of days.

Benchmarks archive 2025-07-28

All 1 leaderboard whose dataset resolves to this page shown (sort by any header). "First row" is the archive's own first row at snapshot, in the archive's row order; nothing here re-ranks and metric direction is not asserted.

First row (archive order)PaperCode
Medical Code Prediction MIMIC-IV ICD-9 PLM-ICD AUC Macro 97.2 Automated Medical Coding on MIMIC-III and MIMIC-IV: A... joakimedin/medical-coding-reproducibility 6 Compare

Papers archive 2025-07-28

1 shown of 1 paper with a leaderboard row on this dataset's benchmarks, newest first. The archive's own "papers using this dataset" list was never published, so this is the benchmark-backed subset; the archive's count for this dataset is 1. The Syntology column is from Syntology's graph (read 2026-09-24), stated per sample; it is not part of any archive number.

DateSamples run Syntology
Automated Medical Coding on MIMIC-III and MIMIC-IV: A Critical Review and Replicability Study 1 6 21 Apr 2023 not harvested

Dataset loaders archive 2025-07-28

No loader listed in the archive.

Tasks archive 2025-07-28

License archive 2025-07-28

PhysioNet Credentialed Health Data License 1.5.0

Modalities archive 2025-07-28

Languages archive 2025-07-28

Variants archive 2025-07-28

  • MIMIC-IV ICD-9

1 variant name, as the archive lists them.

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