Datasets › MedMentions
MedMentions
MedMentions is a new manually annotated resource for the recognition of biomedical concepts. What distinguishes MedMentions from other annotated biomedical corpora is its size (over 4,000 abstracts and over 350,000 linked mentions), as well as the size of the concept ontology (over 3 million concepts from UMLS 2017) and its broad coverage of biomedical disciplines.
Source: MedMentions: A Large Biomedical Corpus Annotated with UMLS Concepts
Benchmarks archive 2025-07-28
All 1 leaderboard whose dataset resolves to this page shown (sort by any header). "First row" is the archive's own first row at snapshot, in the archive's row order; nothing here re-ranks and metric direction is not asserted.
| First row (archive order) | Paper | Code | ||||
|---|---|---|---|---|---|---|
| Entity Linking | MedMentions | ArboEL Accuracy 75.73 | Entity Linking via Explicit Mention-Mention Coreference Modeling | dhdhagar/arboEL | 3 | Compare |
Papers archive 2025-07-28
2 shown of 2 papers with a leaderboard row on this dataset's benchmarks, newest first. The archive's own "papers using this dataset" list was never published, so this is the benchmark-backed subset; the archive's count for this dataset is 48. The Syntology column is from Syntology's graph (read 2026-09-24), stated per sample; it is not part of any archive number.
| Date | Samples run Syntology | |||
|---|---|---|---|---|
| Entity Linking via Explicit Mention-Mention Coreference Modeling | 1 | 2 | 1 Jul 2022 | not harvested |
| BioBART: Pretraining and Evaluation of A Biomedical Generative Language Model | 1 | 1 | 8 Apr 2022 | not harvested |
Dataset loaders archive 2025-07-28
1 loader as listed in the archive; links are outbound and not re-checked here.
Tasks archive 2025-07-28
License archive 2025-07-28
No licence recorded in the archive. Absence here is not a statement about the dataset's terms.
Modalities archive 2025-07-28
Languages archive 2025-07-28
No language tagged.
Variants archive 2025-07-28
- MedMentions
1 variant name, as the archive lists them.
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