Datasets › GDSC
GDSC (Genomics of Drug Sensitivity in Cancer)
We have characterized 1000 human cancer cell lines and screened them with 100s of compounds. On this website, you will find drug response data and genomic markers of sensitivity.
The Genomics of Drug Sensitivity in Cancer Project - http://www.cancerrxgene.org/ - was part of a Wellcome Trust-funded collaboration between The Cancer Genome Project at the Wellcome Sanger Institute (UK) and the Center for Molecular Therapeutics, Massachusetts General Hospital Cancer Center (USA). This collaboration integrated the expertise at both sites toward the goal of identifying cancer biomarkers that can be used to identify genetically defined subsets of patients most likely to respond to cancer therapies.
We screened >1000 genetically characterized human cancer cell lines with a wide range of anti-cancer therapeutics. These compounds included cytotoxic chemotherapeutics as well as targeted therapeutics from commercial sources, academic collaborators, and the biotech and pharmaceutical industries.
The sensitivity patterns of the cell lines were correlated with extensive genomic and expression data to identify genetic features that are predictive of sensitivity. This large collection of cell lines enabled us to capture much of the genomic heterogeneity that underlies human cancer, and which appears to play a critical role in determining the variable response of patients to treatment with specific agents.
Benchmarks archive 2025-07-28
All 1 leaderboard whose dataset resolves to this page shown (sort by any header). "First row" is the archive's own first row at snapshot, in the archive's row order; nothing here re-ranks and metric direction is not asserted.
| First row (archive order) | Paper | Code | ||||
|---|---|---|---|---|---|---|
| Drug Response Prediction | GDSC | CLDR Pearson correlation coefficient (PCC) 0.5360 | CLDR: Contrastive Learning Drug Response Models from... | gitee.com/xiaoyibang/clipdrug | 1 | Compare |
Papers archive 2025-07-28
1 shown of 1 paper with a leaderboard row on this dataset's benchmarks, newest first. The archive's own "papers using this dataset" list was never published, so this is the benchmark-backed subset; the archive's count for this dataset is 4. The Syntology column is from Syntology's graph (read 2026-09-24), stated per sample; it is not part of any archive number.
| Date | Samples run Syntology | |||
|---|---|---|---|---|
| CLDR: Contrastive Learning Drug Response Models from Natural Language Supervision | 1 | 1 | 17 Dec 2023 | not harvested |
Dataset loaders archive 2025-07-28
No loader listed in the archive.
Tasks archive 2025-07-28
License archive 2025-07-28
The data files are experimental and academic in nature and are not licensed or certified by any regulatory body. Genome Research Limited provides access to data files on an “as is” basis and excludes all warranties of any kind (express or implied).
Modalities archive 2025-07-28
Languages archive 2025-07-28
Variants archive 2025-07-28
- GDSC
1 variant name, as the archive lists them.
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