Datasets › FMD
FMD (Fluorescence Microscopy Denoising)
The Fluorescence Microscopy Denoising (FMD) dataset is dedicated to Poisson-Gaussian denoising. The dataset consists of 12,000 real fluorescence microscopy images obtained with commercial confocal, two-photon, and wide-field microscopes and representative biological samples such as cells, zebrafish, and mouse brain tissues. Image averaging is used to effectively obtain ground truth images and 60,000 noisy images with different noise levels.
Source: https://arxiv.org/abs/1812.10366 Image Source: https://github.com/bmmi/denoising-fluorescence
Benchmarks archive 2025-07-28
All 2 leaderboards whose dataset resolves to this page shown (sort by any header). "First row" is the archive's own first row at snapshot, in the archive's row order; nothing here re-ranks and metric direction is not asserted.
| First row (archive order) | Paper | Code | ||||
|---|---|---|---|---|---|---|
| Image Denoising | FMD | NOise2NOise PSNR 8-10dB | Machine learning for faster and smarter fluorescence... | ND-HowardGroup/JPP_review_code_2020 | 1 | Compare |
| intensity image denoising | FMD | Noise2Noise and DnCNN PSNR 7.5dB improvement | Instant Image Denoising Plugin for ImageJ using... | varunmannam/Image_denoising | 1 | Compare |
Papers archive 2025-07-28
2 shown of 2 papers with a leaderboard row on this dataset's benchmarks, newest first. The archive's own "papers using this dataset" list was never published, so this is the benchmark-backed subset; the archive's count for this dataset is 17. The Syntology column is from Syntology's graph (read 2026-09-24), stated per sample; it is not part of any archive number.
| Date | Samples run Syntology | |||
|---|---|---|---|---|
| Machine learning for faster and smarter fluorescence lifetime imaging microscopy | 1 | 1 | 5 Aug 2020 | not harvested |
| Instant Image Denoising Plugin for ImageJ using Convolutional Neural Networks | 1 | 1 | not harvested |
Dataset loaders archive 2025-07-28
1 loader as listed in the archive; links are outbound and not re-checked here.
Tasks archive 2025-07-28
License archive 2025-07-28
No licence recorded in the archive. Absence here is not a statement about the dataset's terms.
Modalities archive 2025-07-28
Languages archive 2025-07-28
No language tagged.
Variants archive 2025-07-28
- FMD
1 variant name, as the archive lists them.
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