Datasets › 10 Synthetic Genomics Datasets
10 Synthetic Genomics Datasets
These are 10 synthetic genomics datasets generated with NEAT v3 (based on TP53 gene of Homo Sapiens) for the use case of benchmarking somatic variant callers. To find more about our generating framework please visit synth4bench GitHub repository.
The datasets explore intrinsic NGS data parameters for the use case of observing their effect on tumor-only somatic variant calling algorithms. From the 10 datasets, there are 5 of them with different coverage (while keeping all other parameters fixed) and 5 with varying read length. The reads in all datasets are paired-end .
Benchmarks archive 2025-07-28
All 1 leaderboard whose dataset resolves to this page shown (sort by any header). "First row" is the archive's own first row at snapshot, in the archive's row order; nothing here re-ranks and metric direction is not asserted.
| First row (archive order) | Paper | Code | ||||
|---|---|---|---|---|---|---|
| Sequential Pattern Mining | 10 Synthetic Genomics Datasets | cnn 1 Image, 2*2 Stitching, Exact Accuracy 80 | Causal Analysis of Customer Churn Using Deep Learning | DavidHason/Causal_Analysis | 1 | Compare |
Papers archive 2025-07-28
1 shown of 1 paper with a leaderboard row on this dataset's benchmarks, newest first. The archive's own "papers using this dataset" list was never published, so this is the benchmark-backed subset; the archive's count for this dataset is 8. The Syntology column is from Syntology's graph (read 2026-09-24), stated per sample; it is not part of any archive number.
| Date | Samples run Syntology | |||
|---|---|---|---|---|
| Causal Analysis of Customer Churn Using Deep Learning | 1 | 1 | 20 Apr 2023 | not harvested |
Dataset loaders archive 2025-07-28
No loader listed in the archive.
Tasks archive 2025-07-28
License archive 2025-07-28
MIT
Modalities archive 2025-07-28
Languages archive 2025-07-28
No language tagged.
Variants archive 2025-07-28
- 10 Synthetic Genomics Datasets
1 variant name, as the archive lists them.
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