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graph_data_obj_to_nx_simple

Syntologyentry name in harvested coderead from the graph 2026-09-24

graph_data_obj_to_nx_simple appears in the code Syntology harvested for 11 papers, as 4 distinct code bodies found in 11 places (a place is one code body under one paper). At least one of them ran in 10 of the papers; 0 of the code bodies carry a behaviour fingerprint.

What this page is not. Routines are grouped here by the exact string of their function or class name. Nothing asserts that two samples named graph_data_obj_to_nx_simple do the same thing, share code, or are comparable; the name is a string, not an identity. Behaviour outputs (what a fingerprinted sample returned on the shared battery) are not in this export and are not shown here; the graph at syntology.ai holds them. "Ran" means executed on a synthesized fixture, not that the code is correct or reproduces a paper.

Samples Syntology

Syntology ran 3 of the 4 distinct code bodies named graph_data_obj_to_nx_simple; 1 is unverified. One tile per status, in the site's fixed vocabulary, each code body counted once:

1ran · honoured contract
0ran · violated contract
0ran · our draft was wrong
0ran · fixture could not drive it
2ran
1unverified
0fingerprinted

Licence is a property of each copy, so it is counted per place: 6 of the 11 places are pointer only (Syntology does not serve that copy's text). This site shows no code text for any sample; every row below links to the file in its repository where the record names one.

“Ran” means the sample executed on a synthesized input; it does not mean the output is correct. “Honoured” and “violated” refer to a contract Syntology drafted from the code itself; “our draft was wrong” and “fixture could not drive it” are failures of Syntology's instrument, not of the code, and those samples did run. The ran count above is every status except unverified, the same rule as each paper page.

Papers

11 papers shown of 11, newest first; 11 places in the table. A paper with no recorded date is placed by the month its arXiv id encodes, shown in the Date column as YYYY-MM (from id). One row per place: a paper whose repository defines the name more than once appears more than once, and the same code body held for several papers appears once under each, with the same status. Titles and dates are the archive's archive 2025-07-28 for papers in the archive. Status and fingerprint are Syntology's record of each code body; licence is recorded for each place. The File cell ends with the code body's code_sha256, Syntology's identity for that exact code: an agent fetches the stored sample with Syntology's MCP tool get_code(code_sha256="…") (how to connect); click an identity to copy that call.

PaperDateFileStatus SyntologyLicence
RELIEF: Reinforcement Learning Empowered Graph Feature Prompt Tuning 6 Aug 2024 JasonZhujp/RELIEF/graph_level/loader.py 287484b87212f47d ran · honoured contract no licence file found · pointer only
ZeroDDI: A Zero-Shot Drug-Drug Interaction Event Prediction Method with Semantic Enhanced Learning and Dual-Modal Uniform Alignment 1 Jul 2024 wzy-Sarah/ZeroDDI/models/left/graph/graph_init.py 287484b87212f47d ran · honoured contract no licence file found · pointer only
Where to Mask: Structure-Guided Masking for Graph Masked Autoencoders 24 Apr 2024 LiuChuang0059/StructMAE/StructMAE-L/chem/loader.py 287484b87212f47d ran · honoured contract no licence file found · pointer only
Rethinking Tokenizer and Decoder in Masked Graph Modeling for Molecules 23 Oct 2023 syr-cn/simsgt/chem/loader.py 287484b87212f47d ran · honoured contract no licence file found · pointer only
Fragment-based Pretraining and Finetuning on Molecular Graphs 5 Oct 2023 lvkd84/graphfp/long-range/loader.py 0b56b7fab3aefc9e ran no licence file found · pointer only
Uncovering Neural Scaling Laws in Molecular Representation Learning 15 Sep 2023 data-reindeer/nsl_mrl/datasets/molnet.py 2c709535eb367b46 ran MIT (permissive)
Motif-aware Attribute Masking for Molecular Graph Pre-training 8 Sep 2023 einae-nd/moama-dev/loader.py 287484b87212f47d ran · honoured contract no licence file found · pointer only
Hierarchical Grammar-Induced Geometry for Data-Efficient Molecular Property Prediction 4 Sep 2023 gmh14/Geo-DEG/GCN/loader.py 287484b87212f47d ran · honoured contract MIT (permissive)
Automated 3D Pre-Training for Molecular Property Prediction 13 Jun 2023 lars-research/3d-pgt/datasets/molecule_datasets.py 4a563e1e2a6aa4b8 unverified MIT (permissive)
Generalization in Graph Neural Networks: Improved PAC-Bayesian Bounds on Graph Diffusion 9 Feb 2023 neu-statsml-research/generalization-in-graph-neural-networks/src/loader.py 287484b87212f47d ran · honoured contract MIT (permissive)
Strategies for Pre-training Graph Neural Networks 29 May 2019 leffff/any-domain-pretrain-gnns/modules/util.py 287484b87212f47d ran · honoured contract MIT (permissive)

This site shows no code text; each File cell links to the file on GitHub at the repository's current default branch, which may have changed since the harvest. "Pointer only" means Syntology does not serve that copy's text, for one of four reasons: no licence file was found; the licence was not identified; the licence is recorded as permissive but that copy's record is not marked cleared; or the licence is outside the permissive list Syntology serves text under (MIT, Apache-2.0, BSD and similar). Some licences outside that list permit redistribution, such as WTFPL, and GPL-3.0 under its conditions; they are simply not on the list. Hover a licence cell for the reason. Per-sample records for a paper are on its paper page under "Code Syntology ran".

Report a problem or propose a change · a person checks every report against the paper or source before anything changes; decisions are listed on /corrections