{"url":"/task/protein-interface-prediction","name":"Protein Interface Prediction","slug":"protein-interface-prediction","description_markdown":"How and where proteins interface with one another can ultimately impact the proteins' functions along with a range of other biological processes. As such, precise computational methods for protein interface prediction (PIP) come highly sought after as they could yield significant advances in drug discovery and design as well as protein function analysis.","categories":[{"name":"Medical","url":"/area/medical"},{"name":"Miscellaneous","url":"/area/miscellaneous"}],"source":{"archive":"pwc-archive (Hugging Face), CC BY-SA 4.0","snapshot":"2025-07-28","slug_source":"derived"},"counts":{"papers_tagged":7,"papers_with_code":4,"benchmarks":0,"benchmark_tables_in_archive":0,"benchmark_tables_shown":0,"benchmark_tables_withheld_as_spam":0,"benchmark_definition":"a leaderboard table with at least one row; benchmark_tables_shown also counts the zero-row tables; benchmark_tables_in_archive adds the tables withheld as spam","datasets":0,"subtasks":0,"parent_tasks":1},"benchmarks":[],"datasets":[],"subtasks":[],"parent_tasks":[{"url":"/task/protein-structure-prediction","name":"Protein Structure Prediction"}],"papers":{"order":"repositories listed in the archive (desc), then date (desc); the archive holds no stars","population":"papers tagged with this task that list at least one repository in the archive","shown":4,"of":4,"tagged_in_all":7,"items":[{"url":"/paper/protein-interface-prediction-using-graph","title":"Protein Interface Prediction using Graph Convolutional Networks","date":"2017-12-01","arxiv_id":null,"repositories_listed":2,"syntology":null},{"url":"/paper/when-geometric-deep-learning-meets-pretrained","title":"Integration of Pre-trained Protein Language Models into Geometric Deep Learning Networks","date":"2022-12-07","arxiv_id":"2212.03447","repositories_listed":1,"syntology":null},{"url":"/paper/dips-plus-the-enhanced-database-of","title":"DIPS-Plus: The Enhanced Database of Interacting Protein Structures for Interface Prediction","date":"2021-06-06","arxiv_id":"2106.04362","repositories_listed":1,"syntology":null},{"url":"/paper/transferrable-end-to-end-learning-for-protein","title":"End-to-End Learning on 3D Protein Structure for Interface Prediction","date":"2018-07-03","arxiv_id":"1807.01297","repositories_listed":1,"syntology":{"n":1,"n_ran":0,"n_unverified":1,"n_pointer_only":0}}],"syntology_records":1,"syntology_note":"a paper without a record is not a recorded non-run: it may lack an arXiv id or simply be absent from the graph layer"},"description_links":{"kept":0,"unwrapped_to_text":0,"bare_urls_linked":0,"relative_images_dropped":0,"rule":"internal links are kept only when the target slug exists in the catalog"},"syntology":{"read_at":"2026-09-24T18:15:14+00:00","claim":"Per-sample execution status on synthesized fixtures ('ran N of M samples'); not a correctness claim and not a ranking signal.","status_vocabulary":{"ran_honours":"ran, honoured the contract we drafted","ran_violates":"ran, violated the contract we drafted","ran_draft_wrong":"ran; our contract draft was wrong, not the code","ran_fixture":"ran; our fixture could not drive it","ran":"ran on a synthesized input","unverified":"unverified (harvested, no recorded run)"}},"not_shown":{"libraries":"the archive has no per-task library table","trend_sparklines":"the Trend column of the benchmarks table was a rendered image; it is not in the archive","social_and_latest_sorts":"stars and social signals are not in the archive"}}