{"about":{"site":"https://codewithpapers.app","non_affiliation":"Code with Papers and Syntology are not affiliated with, endorsed by, or sponsored by Papers with Code, Meta, or the pwc-archive mirror.","licence":"CC BY-SA 4.0","licence_url":"https://creativecommons.org/licenses/by-sa/4.0/legalcode","attribution":"https://codewithpapers.app/attribution","modified":"archive material modified by Syntology; see the attribution page"},"url":"/paper/wbcatt-a-white-blood-cell-dataset-annotated-1","title":"WBCAtt: A White Blood Cell Dataset Annotated with Detailed Morphological Attributes","arxiv_id":"2306.13531","date":"2023-06-23","proceeding":"NeurIPS 2023 11","authors":["Satoshi Tsutsui","Winnie Pang","Bihan Wen"],"abstract":"The examination of blood samples at a microscopic level plays a fundamental role in clinical diagnostics, influencing a wide range of medical conditions. For instance, an in-depth study of White Blood Cells (WBCs), a crucial component of our blood, is essential for diagnosing blood-related diseases such as leukemia and anemia. While multiple datasets containing WBC images have been proposed, they mostly focus on cell categorization, often lacking the necessary morphological details to explain such categorizations, despite the importance of explainable artificial intelligence (XAI) in medical domains. This paper seeks to address this limitation by introducing comprehensive annotations for WBC images. Through collaboration with pathologists, a thorough literature review, and manual inspection of microscopic images, we have identified 11 morphological attributes associated with the cell and its components (nucleus, cytoplasm, and granules). We then annotated ten thousand WBC images with these attributes. Moreover, we conduct experiments to predict these attributes from images, providing insights beyond basic WBC classification. As the first public dataset to offer such extensive annotations, we also illustrate specific applications that can benefit from our attribute annotations. Overall, our dataset paves the way for interpreting WBC recognition models, further advancing XAI in the fields of pathology and hematology.","url_abs":"https://arxiv.org/abs/2306.13531v2","url_pdf":"https://arxiv.org/pdf/2306.13531v2.pdf","source":{"archive":"pwc-archive (Hugging Face), CC BY-SA 4.0","snapshot":"2025-07-28","licence_url":"https://creativecommons.org/licenses/by-sa/4.0/legalcode","row_kind":"abstracts"},"code_links":[{"paper_slug":"wbcatt-a-white-blood-cell-dataset-annotated-1","repo_url":"https://github.com/apple2373/wbcatt","is_official":1,"mentioned_in_paper":1,"mentioned_in_github":0,"framework":"pytorch","reach":null}],"tasks":[{"task_slug":"attribute","task_name":"Attribute"},{"task_slug":"xai","task_name":"Explainable Artificial Intelligence (XAI)"},{"task_slug":"explainable-artificial-intelligence","task_name":"Explainable artificial intelligence"}],"methods":[{"method_slug":"focus","method_name":"Focus"}],"datasets_introduced":[],"methods_introduced":[],"results":[],"syntology":{"atlas_url":"https://app.syntology.ai/?focus=2306.13531","mcp":{"get_harvested_code_for_paper":{"arxiv_id":"2306.13531"}},"developers":"https://syntology.ai/developers","read_at":"2026-09-24T18:15:14+00:00","read_at_is":"when the build read Syntology's graph, not when any sample ran","claim":"Per-sample execution status on synthesized fixtures; not a correctness claim about the paper. Samples come from repositories linked to the paper, official or community; repo_kind says which.","repos":[{"provenance":"external:paperswithcode_snapshot_2025-07-28","url":"https://github.com/apple2373/wbcatt","reach":null}],"summary":{"ran_fixture":1,"unverified":1},"by_repo_kind":{"official":{"samples":2,"ran":1,"repositories":1}},"repo_kind_vocabulary":{"official":"The archive marks this repository official for the paper","named_in_paper":"The archive records that the paper mentions this repository; it is not marked official","listed":"In the archive's code links for this paper, not marked official and not recorded as mentioned in the paper","found_in_text":"Syntology found this repository in the paper's own text; whether it is the authors' implementation is not asserted","community":"Not in the archive's code links for this paper; a community repository Syntology harvested"},"n_pointer_only_for_licence":0,"samples":[{"code_sha256_prefix":"6bc4993019f86d1a","entry":"calculate_metrics","repo":"apple2373/wbcatt","repo_kind":"official","path":"submission/traineval.py","file_url":"https://github.com/apple2373/wbcatt/blob/HEAD/submission/traineval.py","link_basis":"first_harvest_node","language":"python","status":"ran_fixture","verification_level":1,"contract_check":"RAISES","metamorphic_tier":"deterministic","behaviour_fingerprint":false,"licence":"MIT","inline_ok":true,"mcp_get_code":{"code_sha256":"6bc4993019f86d1a"}},{"code_sha256_prefix":"b4af055d658c09f7","entry":"resume_model","repo":"apple2373/wbcatt","repo_kind":"official","path":"submission/traineval.py","file_url":"https://github.com/apple2373/wbcatt/blob/HEAD/submission/traineval.py","link_basis":"first_harvest_node","language":"python","status":"unverified","verification_level":0,"contract_check":null,"metamorphic_tier":null,"behaviour_fingerprint":false,"licence":"MIT","inline_ok":true,"mcp_get_code":{"code_sha256":"b4af055d658c09f7"}}]},"arxiv_metadata":null,"syntology_extracted_results":null}