{"about":{"site":"https://codewithpapers.app","non_affiliation":"Code with Papers and Syntology are not affiliated with, endorsed by, or sponsored by Papers with Code, Meta, or the pwc-archive mirror.","licence":"CC BY-SA 4.0","licence_url":"https://creativecommons.org/licenses/by-sa/4.0/legalcode","attribution":"https://codewithpapers.app/attribution","modified":"archive material modified by Syntology; see the attribution page"},"url":"/paper/unsupervised-instance-segmentation-in","title":"Unsupervised Instance Segmentation in Microscopy Images via Panoptic Domain Adaptation and Task Re-weighting","arxiv_id":"2005.02066","date":"2020-05-05","proceeding":"CVPR 2020 6","authors":["Dongnan Liu","Donghao Zhang","Yang song","Fan Zhang","Lauren O'Donnell","Heng Huang","Mei Chen","Weidong Cai"],"abstract":"Unsupervised domain adaptation (UDA) for nuclei instance segmentation is important for digital pathology, as it alleviates the burden of labor-intensive annotation and domain shift across datasets. In this work, we propose a Cycle Consistency Panoptic Domain Adaptive Mask R-CNN (CyC-PDAM) architecture for unsupervised nuclei segmentation in histopathology images, by learning from fluorescence microscopy images. More specifically, we first propose a nuclei inpainting mechanism to remove the auxiliary generated objects in the synthesized images. Secondly, a semantic branch with a domain discriminator is designed to achieve panoptic-level domain adaptation. Thirdly, in order to avoid the influence of the source-biased features, we propose a task re-weighting mechanism to dynamically add trade-off weights for the task-specific loss functions. Experimental results on three datasets indicate that our proposed method outperforms state-of-the-art UDA methods significantly, and demonstrates a similar performance as fully supervised methods.","url_abs":"https://arxiv.org/abs/2005.02066v1","url_pdf":"https://arxiv.org/pdf/2005.02066v1.pdf","source":{"archive":"pwc-archive (Hugging Face), CC BY-SA 4.0","snapshot":"2025-07-28","licence_url":"https://creativecommons.org/licenses/by-sa/4.0/legalcode","row_kind":"abstracts"},"code_links":[{"paper_slug":"unsupervised-instance-segmentation-in","repo_url":"https://github.com/dliu5812/PDAM","is_official":1,"mentioned_in_paper":0,"mentioned_in_github":0,"framework":"pytorch","reach":null}],"tasks":[{"task_slug":"domain-adaptation","task_name":"Domain Adaptation"},{"task_slug":"instance-segmentation","task_name":"Instance Segmentation"},{"task_slug":"segmentation","task_name":"Segmentation"},{"task_slug":"semantic-segmentation","task_name":"Semantic Segmentation"},{"task_slug":"unsupervised-domain-adaptation","task_name":"Unsupervised Domain Adaptation"},{"task_slug":"unsupervised-instance-segmentation","task_name":"Unsupervised Instance Segmentation"}],"methods":[{"method_slug":"convolution","method_name":"Convolution"},{"method_slug":"mask-r-cnn","method_name":"Mask R-CNN"},{"method_slug":"rpn","method_name":"RPN"},{"method_slug":"roi-align","method_name":"RoIAlign"},{"method_slug":"softmax","method_name":"Softmax"}],"datasets_introduced":[],"methods_introduced":[],"results":[],"syntology":{"atlas_url":"https://app.syntology.ai/?focus=2005.02066","mcp":{"get_harvested_code_for_paper":{"arxiv_id":"2005.02066"}},"developers":"https://syntology.ai/developers","read_at":"2026-09-24T18:15:14+00:00","read_at_is":"when the build read Syntology's graph, not when any sample ran","claim":"Per-sample execution status on synthesized fixtures; not a correctness claim about the paper. 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