{"about":{"site":"https://codewithpapers.app","non_affiliation":"Code with Papers and Syntology are not affiliated with, endorsed by, or sponsored by Papers with Code, Meta, or the pwc-archive mirror.","licence":"CC BY-SA 4.0","licence_url":"https://creativecommons.org/licenses/by-sa/4.0/legalcode","attribution":"https://codewithpapers.app/attribution","modified":"archive material modified by Syntology; see the attribution page"},"url":"/paper/mitoseg-mitochondria-segmentation-tool","title":"MitoSeg: Mitochondria Segmentation Tool","arxiv_id":"2409.11974","date":"2024-09-18","proceeding":null,"authors":["Faris Serdar Taşel","Efe Çiftci"],"abstract":"Recent studies suggest a potential link between the physical structure of mitochondria and neurodegenerative diseases. With advances in Electron Microscopy techniques, it has become possible to visualize the boundary and internal membrane structures of mitochondria in detail. It is crucial to automatically segment mitochondria from these images to investigate the relationship between mitochondria and diseases. In this paper, we present a software solution for mitochondrial segmentation, highlighting mitochondria boundaries in electron microscopy tomography images and generating corresponding 3D meshes.","url_abs":"https://arxiv.org/abs/2409.11974v1","url_pdf":"https://arxiv.org/pdf/2409.11974v1.pdf","source":{"archive":"pwc-archive (Hugging Face), CC BY-SA 4.0","snapshot":"2025-07-28","licence_url":"https://creativecommons.org/licenses/by-sa/4.0/legalcode","row_kind":"abstracts"},"code_links":[{"paper_slug":"mitoseg-mitochondria-segmentation-tool","repo_url":"https://github.com/fstasel/mitoseg","is_official":1,"mentioned_in_paper":1,"mentioned_in_github":0,"framework":"none","reach":null}],"tasks":[{"task_slug":"segmentation","task_name":"Segmentation"}],"methods":[],"datasets_introduced":[],"methods_introduced":[],"results":[],"syntology":{"atlas_url":null,"mcp":null,"developers":"https://syntology.ai/developers"},"arxiv_metadata":null,"syntology_extracted_results":null}