{"about":{"site":"https://codewithpapers.app","non_affiliation":"Code with Papers and Syntology are not affiliated with, endorsed by, or sponsored by Papers with Code, Meta, or the pwc-archive mirror.","licence":"CC BY-SA 4.0","licence_url":"https://creativecommons.org/licenses/by-sa/4.0/legalcode","attribution":"https://codewithpapers.app/attribution","modified":"archive material modified by Syntology; see the attribution page"},"url":"/paper/mbss-t1-model-based-self-supervised-motion","title":"MBSS-T1: Model-Based Subject-Specific Self-Supervised Motion Correction for Robust Cardiac T1 Mapping","arxiv_id":"2408.11992","date":"2024-08-21","proceeding":null,"authors":["Eyal Hanania","Adi Zehavi-Lenz","Ilya Volovik","Daphna Link-Sourani","Israel Cohen","Moti Freiman"],"abstract":"Cardiac T1 mapping is a valuable quantitative MRI technique for diagnosing diffuse myocardial diseases. Traditional methods, relying on breath-hold sequences and cardiac triggering based on an ECG signal, face challenges with patient compliance, limiting their effectiveness. Image registration can enable motion-robust cardiac T1 mapping, but inherent intensity differences between time points pose a challenge. We present MBSS-T1, a subject-specific self-supervised model for motion correction in cardiac T1 mapping. Physical constraints, implemented through a loss function comparing synthesized and motion-corrected images, enforce signal decay behavior, while anatomical constraints, applied via a Dice loss, ensure realistic deformations. The unique combination of these constraints results in motion-robust cardiac T1 mapping along the longitudinal relaxation axis. In a 5-fold experiment on a public dataset of 210 patients (STONE sequence) and an internal dataset of 19 patients (MOLLI sequence), MBSS-T1 outperformed baseline deep-learning registration methods. It achieved superior model fitting quality ($R^2$: 0.975 vs. 0.941, 0.946 for STONE; 0.987 vs. 0.982, 0.965 for MOLLI free-breathing; 0.994 vs. 0.993, 0.991 for MOLLI breath-hold), anatomical alignment (Dice: 0.89 vs. 0.84, 0.88 for STONE; 0.963 vs. 0.919, 0.851 for MOLLI free-breathing; 0.954 vs. 0.924, 0.871 for MOLLI breath-hold), and visual quality (4.33 vs. 3.38, 3.66 for STONE; 4.1 vs. 3.5, 3.28 for MOLLI free-breathing; 3.79 vs. 3.15, 2.84 for MOLLI breath-hold). MBSS-T1 enables motion-robust T1 mapping for broader patient populations, overcoming challenges such as suboptimal compliance, and facilitates free-breathing cardiac T1 mapping without requiring large annotated datasets. Our code is available at https://github.com/TechnionComputationalMRILab/MBSS-T1.","url_abs":"https://arxiv.org/abs/2408.11992v3","url_pdf":"https://arxiv.org/pdf/2408.11992v3.pdf","source":{"archive":"pwc-archive (Hugging Face), CC BY-SA 4.0","snapshot":"2025-07-28","licence_url":"https://creativecommons.org/licenses/by-sa/4.0/legalcode","row_kind":"abstracts"},"code_links":[{"paper_slug":"mbss-t1-model-based-self-supervised-motion","repo_url":"https://github.com/technioncomputationalmrilab/mbss-t1","is_official":1,"mentioned_in_paper":1,"mentioned_in_github":0,"framework":"pytorch","reach":null},{"paper_slug":"mbss-t1-model-based-self-supervised-motion","repo_url":"https://github.com/eyalhana/pcmc-t1","is_official":0,"mentioned_in_paper":0,"mentioned_in_github":1,"framework":"pytorch","reach":null}],"tasks":[{"task_slug":"image-registration","task_name":"Image Registration"},{"task_slug":"quantitative-mri","task_name":"Quantitative MRI"}],"methods":[],"datasets_introduced":[],"methods_introduced":[],"results":[],"syntology":{"atlas_url":null,"mcp":null,"developers":"https://syntology.ai/developers"},"arxiv_metadata":null,"syntology_extracted_results":null}