{"about":{"site":"https://codewithpapers.app","non_affiliation":"Code with Papers and Syntology are not affiliated with, endorsed by, or sponsored by Papers with Code, Meta, or the pwc-archive mirror.","licence":"CC BY-SA 4.0","licence_url":"https://creativecommons.org/licenses/by-sa/4.0/legalcode","attribution":"https://codewithpapers.app/attribution","modified":"archive material modified by Syntology; see the attribution page"},"url":"/paper/localising-the-seizure-onset-zone-from-single","title":"Localising the Seizure Onset Zone from Single-Pulse Electrical Stimulation Responses with a CNN Transformer","arxiv_id":"2403.20324","date":"2024-03-29","proceeding":null,"authors":["Jamie Norris","Aswin Chari","Dorien van Blooijs","Gerald Cooray","Karl Friston","Martin Tisdall","Richard Rosch"],"abstract":"Epilepsy is one of the most common neurological disorders, often requiring surgical intervention when medication fails to control seizures. For effective surgical outcomes, precise localisation of the epileptogenic focus - often approximated through the Seizure Onset Zone (SOZ) - is critical yet remains a challenge. Active probing through electrical stimulation is already standard clinical practice for identifying epileptogenic areas. Our study advances the application of deep learning for SOZ localisation using Single-Pulse Electrical Stimulation (SPES) responses, with two key contributions. Firstly, we implement an existing deep learning model to compare two SPES analysis paradigms: divergent and convergent. These paradigms evaluate outward and inward effective connections, respectively. We assess the generalisability of these models to unseen patients and electrode placements using held-out test sets. Our findings reveal a notable improvement in moving from a divergent (AUROC: 0.574) to a convergent approach (AUROC: 0.666), marking the first application of the latter in this context. Secondly, we demonstrate the efficacy of CNN Transformers with cross-channel attention in handling heterogeneous electrode placements, increasing the AUROC to 0.730. These findings represent a significant step in modelling patient-specific intracranial EEG electrode placements in SPES. Future work will explore integrating these models into clinical decision-making processes to bridge the gap between deep learning research and practical healthcare applications.","url_abs":"https://arxiv.org/abs/2403.20324v3","url_pdf":"https://arxiv.org/pdf/2403.20324v3.pdf","source":{"archive":"pwc-archive (Hugging Face), CC BY-SA 4.0","snapshot":"2025-07-28","licence_url":"https://creativecommons.org/licenses/by-sa/4.0/legalcode","row_kind":"abstracts"},"code_links":[{"paper_slug":"localising-the-seizure-onset-zone-from-single","repo_url":"https://github.com/norrisjamie23/localising_soz_from_spes","is_official":1,"mentioned_in_paper":1,"mentioned_in_github":0,"framework":"pytorch","reach":null}],"tasks":[{"task_slug":"deep-learning","task_name":"Deep Learning"},{"task_slug":"eeg-1","task_name":"EEG"}],"methods":[{"method_slug":"absolute-position-encodings","method_name":"Absolute Position Encodings"},{"method_slug":"adam","method_name":"Adam"},{"method_slug":"attention","method_name":"Attention"},{"method_slug":"bpe","method_name":"BPE"},{"method_slug":"dense-connections","method_name":"Dense Connections"},{"method_slug":"dropout","method_name":"Dropout"},{"method_slug":"focus","method_name":"Focus"},{"method_slug":"label-smoothing","method_name":"Label Smoothing"},{"method_slug":"layer-normalization","method_name":"Layer Normalization"},{"method_slug":"linear-layer","method_name":"Linear Layer"},{"method_slug":"multi-head-attention","method_name":"Multi-Head Attention"},{"method_slug":"position-wise-feed-forward-layer","method_name":"Position-Wise Feed-Forward Layer"},{"method_slug":"residual-connection","method_name":"Residual Connection"},{"method_slug":"softmax","method_name":"Softmax"},{"method_slug":"transformer","method_name":"Transformer"}],"datasets_introduced":[],"methods_introduced":[],"results":[],"syntology":{"syntology_url":null,"atlas_url":null,"mcp":null,"developers":"https://syntology.ai/developers"},"arxiv_metadata":null,"syntology_extracted_results":null}