{"about":{"site":"https://codewithpapers.app","non_affiliation":"Code with Papers and Syntology are not affiliated with, endorsed by, or sponsored by Papers with Code, Meta, or the pwc-archive mirror.","licence":"CC BY-SA 4.0","licence_url":"https://creativecommons.org/licenses/by-sa/4.0/legalcode","attribution":"https://codewithpapers.app/attribution","modified":"archive material modified by Syntology; see the attribution page"},"url":"/paper/hierarchical-transformer-model-for-scientific","title":"Hierarchical Transformer Model for Scientific Named Entity Recognition","arxiv_id":"2203.14710","date":"2022-03-28","proceeding":null,"authors":["Urchade Zaratiana","Pierre Holat","Nadi Tomeh","Thierry Charnois"],"abstract":"The task of Named Entity Recognition (NER) is an important component of many natural language processing systems, such as relation extraction and knowledge graph construction. In this work, we present a simple and effective approach for Named Entity Recognition. The main idea of our approach is to encode the input subword sequence with a pre-trained transformer such as BERT, and then, instead of directly classifying the word labels, another layer of transformer is added to the subword representation to better encode the word-level interaction. We evaluate our approach on three benchmark datasets for scientific NER, particularly in the computer science and biomedical domains. Experimental results show that our model outperforms the current state-of-the-art on SciERC and TDM datasets without requiring external resources or specific data augmentation. Code is available at \\url{https://github.com/urchade/HNER}.","url_abs":"https://arxiv.org/abs/2203.14710v1","url_pdf":"https://arxiv.org/pdf/2203.14710v1.pdf","source":{"archive":"pwc-archive (Hugging Face), CC BY-SA 4.0","snapshot":"2025-07-28","licence_url":"https://creativecommons.org/licenses/by-sa/4.0/legalcode","row_kind":"abstracts"},"code_links":[{"paper_slug":"hierarchical-transformer-model-for-scientific","repo_url":"https://github.com/urchade/hner","is_official":1,"mentioned_in_paper":1,"mentioned_in_github":0,"framework":"pytorch","reach":null}],"tasks":[{"task_slug":"data-augmentation","task_name":"Data Augmentation"},{"task_slug":"cg","task_name":"NER"},{"task_slug":"named-entity-recognition-1","task_name":"Named Entity Recognition"},{"task_slug":"named-entity-recognition-ner","task_name":"Named Entity Recognition (NER)"},{"task_slug":"relation-extraction","task_name":"Relation Extraction"},{"task_slug":"graph-construction","task_name":"graph construction"},{"task_slug":"model","task_name":"model"},{"task_slug":"named-entity-recognition","task_name":"named-entity-recognition"}],"methods":[{"method_slug":"adam","method_name":"Adam"},{"method_slug":"attention","method_name":"Attention"},{"method_slug":"attention-dropout","method_name":"Attention Dropout"},{"method_slug":"bert","method_name":"BERT"},{"method_slug":"dense-connections","method_name":"Dense Connections"},{"method_slug":"dropout","method_name":"Dropout"},{"method_slug":"layer-normalization","method_name":"Layer Normalization"},{"method_slug":"linear-layer","method_name":"Linear Layer"},{"method_slug":"linear-warmup-with-linear-decay","method_name":"Linear Warmup With Linear Decay"},{"method_slug":"multi-head-attention","method_name":"Multi-Head Attention"},{"method_slug":"residual-connection","method_name":"Residual Connection"},{"method_slug":"softmax","method_name":"Softmax"},{"method_slug":"weight-decay","method_name":"Weight Decay"},{"method_slug":"wordpiece","method_name":"WordPiece"}],"datasets_introduced":[],"methods_introduced":[],"results":[],"syntology":{"atlas_url":null,"mcp":null,"developers":"https://syntology.ai/developers"},"arxiv_metadata":null,"syntology_extracted_results":null}