{"about":{"site":"https://codewithpapers.app","non_affiliation":"Code with Papers and Syntology are not affiliated with, endorsed by, or sponsored by Papers with Code, Meta, or the pwc-archive mirror.","licence":"CC BY-SA 4.0","licence_url":"https://creativecommons.org/licenses/by-sa/4.0/legalcode","attribution":"https://codewithpapers.app/attribution","modified":"archive material modified by Syntology; see the attribution page"},"url":"/paper/hierarchical-clustering-visualization-feature","title":"Hierarchical clustering: visualization, feature importance and model selection","arxiv_id":"2112.01372","date":"2021-11-30","proceeding":null,"authors":["Luben M. C. Cabezas","Rafael Izbicki","Rafael B. Stern"],"abstract":"We propose methods for the analysis of hierarchical clustering that fully use the multi-resolution structure provided by a dendrogram. Specifically, we propose a loss for choosing between clustering methods, a feature importance score and a graphical tool for visualizing the segmentation of features in a dendrogram. Current approaches to these tasks lead to loss of information since they require the user to generate a single partition of the instances by cutting the dendrogram at a specified level. Our proposed methods, instead, use the full structure of the dendrogram. The key insight behind the proposed methods is to view a dendrogram as a phylogeny. This analogy permits the assignment of a feature value to each internal node of a tree through an evolutionary model. Real and simulated datasets provide evidence that our proposed framework has desirable outcomes and gives more insights than state-of-art approaches. We provide an R package that implements our methods.","url_abs":"https://arxiv.org/abs/2112.01372v2","url_pdf":"https://arxiv.org/pdf/2112.01372v2.pdf","source":{"archive":"pwc-archive (Hugging Face), CC BY-SA 4.0","snapshot":"2025-07-28","licence_url":"https://creativecommons.org/licenses/by-sa/4.0/legalcode","row_kind":"abstracts"},"code_links":[{"paper_slug":"hierarchical-clustering-visualization-feature","repo_url":"https://github.com/Monoxido45/PhyloHclust","is_official":1,"mentioned_in_paper":0,"mentioned_in_github":0,"framework":"none","reach":{"status":"ok","spdx":"NOASSERTION"}}],"tasks":[{"task_slug":"clustering","task_name":"Clustering"},{"task_slug":"feature-importance","task_name":"Feature Importance"},{"task_slug":"model-selection","task_name":"Model Selection"},{"task_slug":"model","task_name":"model"}],"methods":[],"datasets_introduced":[],"methods_introduced":[],"results":[],"syntology":{"atlas_url":"https://app.syntology.ai/?focus=2112.01372","mcp":null,"developers":"https://syntology.ai/developers"},"arxiv_metadata":null,"syntology_extracted_results":null}